RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SGCEO43556 437 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GMDSO60547 372 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 RBMXL2O75526 392 aaKnown RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 ATP5HO75947 161 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 KRT36O76013 467 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CCNB2O95067 398 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GAS8-AS1O95177 125 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CD74P04233 296 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GRPP07492 148 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CD14P08571 375 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 RAP2AP10114 183 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 FCGR1AP12314 374 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 ACADSP16219 412 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CTRB1P17538 263 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 FUT1P19526 365 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 ATP6V1B2P21281 511 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 PPIFP30405 207 aaKnown RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 SDHAP31040 664 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 OTX1P32242 354 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 BMI1P35226 326 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 AQP2P41181 271 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GPR12P47775 334 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GZMMP51124 257 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CRYBA2P53672 197 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CTXN1P60606 82 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 RPL27P61353 136 aaKnown RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 LCN6P62502 163 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 RPL31P62899 125 aaKnown RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 AQP6Q13520 282 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 C1orf134Q5TEV5 83 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 C1orf146Q5VVC0 180 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 OTPQ5XKR4 325 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CTRB2Q6GPI1 263 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CCDC144NLQ6NUI1 221 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 C8orf82Q6P1X6 216 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CYP2R1Q6VVX0 501 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 LINC00114Q6XXX2 140 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 Q6ZSN1 163 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 KCTD8Q6ZWB6 473 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GTSCR1Q86UQ5 136 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 SPATA24Q86W54 205 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 ZDHHC21Q8IVQ6 265 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 NKAIN4Q8IVV8 208 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 FAM156AQ8NDB6 213 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 OR4D11Q8NGI4 311 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 OR52J3Q8NH60 311 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 OR51A7Q8NH64 312 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 DNAJC9Q8WXX5 260 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 RGP1Q92546 391 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 APOBEC3DQ96AK3 386 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 MED30Q96HR3 178 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 PYURFQ96I23 114 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 NSL1Q96IY1 281 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CCDC140Q96MF4 163 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 RBP7Q96R05 134 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 OR4C12Q96R67 309 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GPX7Q96SL4 187 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 IFT27Q9BW83 186 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 TOLLIPQ9H0E2 274 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GHITMQ9H3K2 345 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 RERGLQ9H628 205 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 GORASP2Q9H8Y8 452 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF556Q9HAH1 456 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 NMNAT1Q9HAN9 279 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 EMC7Q9NPA0 242 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 MEPEQ9NQ76 525 aaPredicted RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 POLE4Q9NR33 117 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 DCAF13Q9NV06 445 aaKnown RBP2.47□□□□□ -2.01
TCOF1-208ENST00000506063 NDUFAF4Q9P032 175 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 DNAJB9Q9UBS3 223 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 ENOPH1Q9UHY7 261 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 FBXL7Q9UJT9 491 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 A4GNTQ9UNA3 340 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 TP53TG1Q9Y2A0 90 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 CDH10Q9Y6N8 788 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 COMMD3-BMI1R4GMX3 469 aa2.47□□□□□ -2.01
TCOF1-208ENST00000506063 IGHV4-4A0A075B6R2 117 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 A0A087WUU8 490 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 TRBV4-1A0A0J9YWV2 114 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 PRSS37A4D1T9 235 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 ARRDC5A6NEK1 342 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 AQP12BA6NM10 295 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 CD300LBA8K4G0 201 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF785A8K8V0 405 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 LINC01619G3V211 115 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 H3BN98 237 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 SOCS2O14508 198 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 AHCYL1O43865 530 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 KHDRBS3O75525 346 aaKnown RBP2.46□□□□□ -2.02
TCOF1-208ENST00000506063 MMP23AO75900 390 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 DNAJC8O75937 253 aaPredicted RBP2.46□□□□□ -2.02
TCOF1-208ENST00000506063 DIRAS1O95057 198 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 LYPD3O95274 346 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 SOX14O95416 240 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 CST1P01037 141 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 IGLV1-47P01700 117 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 IGLV1-40P01703 118 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 HLA-DQA2P01906 255 aa2.46□□□□□ -2.02
TCOF1-208ENST00000506063 RBP4P02753 201 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms