RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TTC4O95801 387 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR8G3PP0DMU2 310 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 ANXA8P13928 327 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 ARL2P36404 184 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 SLC18A1P54219 525 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 CLDN6P56747 220 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 MTPNP58546 118 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 KRTAP10-4P60372 401 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 PAFAH1B2P68402 229 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 SLC35A1P78382 337 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 PSG4Q00888 419 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 IRF8Q02556 426 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 PMVKQ15126 192 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 TPRG1LQ5T0D9 272 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 ANXA8L1Q5VT79 327 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 TTC19Q6DKK2 380 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 THOC7Q6I9Y2 204 aaKnown RBP0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 OTUD6AQ7L8S5 288 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 HS3ST5Q8IZT8 346 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR52K2Q8NGK3 314 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR4K13Q8NH42 304 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 CA5BP1Q8WTZ4 195 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 GLYATL2Q8WU03 294 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 SPACA5Q96QH8 159 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 GABRG3Q99928 467 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 MRPL20Q9BYC9 149 aaKnown RBP0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 NAA50Q9GZZ1 169 aaKnown RBP0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 PXMP2Q9NR77 195 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 CHRAC1Q9NRG0 131 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 SBNO1A3KN83 1393 aa0.77□□□□□ -2.29
HMGB1P29-201ENST00000505659 STRCP1A6NGW2 1772 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 IGHV3-43A0A0B4J1X8 118 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 TRAV8-4A0A0B4J246 113 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 GMNCA6NCL1 334 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 A6NED7 52 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 HACD1B0YJ81 288 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 SUPT3HB4E1H0 165 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 K7EPK0 472 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZNF701M0R085 212 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 PSIP1O75475 530 aaKnown RBP0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR2A4O95047 310 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 P01737 135 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 SNRPAP09012 282 aaKnown RBP0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 CTLA4P16410 223 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 CD82P27701 267 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 CRABP2P29373 138 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 RPS5P46782 204 aaKnown RBP0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 ATP6V0D1P61421 351 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 RAB11AP62491 216 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 RPL10AP62906 217 aaKnown RBP0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 HES1Q14469 280 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 PLCXD3Q63HM9 321 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 FAM231DQ6ZW35 169 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 KATNAL2Q8IYT4 538 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 OFCC1Q8IZS5 231 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 CMTM8Q8IZV2 173 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 GPX8Q8TED1 209 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 ING5Q8WYH8 240 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 NAT6Q93015 286 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR2A7Q96R45 310 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 LRRC19Q9H756 370 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 PRSS16Q9NQE7 514 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR5V1Q9UGF6 321 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 TAC3Q9UHF0 121 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 AMMECR1Q9Y4X0 333 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZNF706Q9Y5V0 76 aaPredicted RBP0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 LCTP09848 1927 aa0.76□□□□□ -2.29
HMGB1P29-201ENST00000505659 CACNA1SQ13698 1873 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 MED13Q9UHV7 2174 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 IGHV2OR16-5A0A0B4J2B6 119 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZNF860A6NHJ4 632 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 CENPXA8MT69 81 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZNF99A8MXY4 864 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 LEUTXA8MZ59 168 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 F5H5P2 479 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 H0YIV9 168 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 CASC3O15234 703 aaKnown RBP0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 SIVA1O15304 175 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 FGF4P08620 206 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 STAG3L3P0CL85 134 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 RALBP11234 206 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 MSR1P21757 451 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 PSMB2P49721 201 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 SPAG1Q07617 926 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 LAMTOR4Q0VGL1 99 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 WDR43Q15061 677 aaKnown RBP eCLIP0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 CST6Q15828 149 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 RAB11BQ15907 218 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 MLIPQ5VWP3 458 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 NOXRED1Q6NXP6 359 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 CLEC2AQ6UVW9 174 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 MRPL21Q7Z2W9 205 aaKnown RBP0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 TMCO2Q7Z6W1 182 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR4K2Q8NGD2 314 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR8A1Q8NGG7 326 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR6K6Q8NGW6 343 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR2V1Q8NHB1 315 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 C2orf15Q8WU43 125 aaKnown RBP0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 BAALCQ8WXS3 180 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 ISOC2Q96AB3 205 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms