RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	DAP	P51397	102 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	EDDM3A	Q14507	147 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	SSX2	Q16385	188 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	PLA1A	Q53H76	456 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	TMEM42	Q69YG0	159 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	OR14K1	Q8NGZ2	314 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	PP6455	Q8WZ26	134 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	EMG1	Q92979	244 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	SNX22	Q96L94	193 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	TBX5	Q99593	518 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	ADGRL4	Q9HBW9	690 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066	SIGLEC9	Q9Y336	463 aa		13.3	□□□□□ -0.28
DDR1-256	ENST00000505066		A6NIN4	97 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	VGLL3	A8MV65	326 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	SULT1C4	O75897	302 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	INMT	O95050	263 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	UBC	P0CG48	685 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	PRKACB	P22694	351 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	RBP2	P50120	134 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	SLC34A1	Q06495	639 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	ATP6AP1	Q15904	470 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	NSUN5P1	Q3KNT7	163 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	HCP5	Q6MZN7	132 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	OR8H2	Q8N162	312 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	BATF2	Q8N1L9	274 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	ZNF676	Q8N7Q3	588 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	C17orf50	Q8WW18	174 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	IMPAD1	Q9NX62	359 aa		13.29	□□□□□ -0.28
DDR1-256	ENST00000505066	SNTN	A6NMZ2	147 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	C17orf98	A8MV24	154 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	AZGP1	P25311	298 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	HTR1F	P30939	366 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	BRS3	P32247	399 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	CDC42	P60953	191 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	TMED1	Q13445	227 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	ZNF273	Q14593	569 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	GRK1	Q15835	563 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	MINOS1	Q5TGZ0	78 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	AADACL4	Q5VUY2	407 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	OR52W1	Q6IF63	320 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	SLC25A26	Q70HW3	274 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	STMN2	Q93045	179 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	SLAMF9	Q96A28	289 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	GAL3ST2	Q9H3Q3	398 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	HES4	Q9HCC6	221 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	MRM2	Q9UI43	246 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	GNG8	Q9UK08	70 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	FOXJ3	Q9UPW0	622 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	TCF19	Q9Y242	345 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	AP4S1	Q9Y587	144 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066	MINOS1-NBL1	R4GNA1	71 aa		13.28	□□□□□ -0.28
DDR1-256	ENST00000505066		A0A1B0GTI1	187 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	ZAR1L	A6NP61	321 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	CIB2	O75838	187 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	ATP5H	O75947	161 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	RPSA	P08865	295 aa	Known RBP	13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	IGHV1-8	P0DP01	117 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	VDAC2	P45880	294 aa	Predicted RBP	13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	MTCP1	P56278	107 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	ACTA2	P62736	377 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	ACTG2	P63267	376 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	ACTC1	P68032	377 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	ACTA1	P68133	377 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	TMEM244	Q5VVB8	128 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	C1orf146	Q5VVC0	180 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	OR8J1	Q8NGP2	316 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	SGCD	Q92629	289 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	CREB3L1	Q96BA8	519 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	R3HDM4	Q96D70	268 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	AJUBA	Q96IF1	538 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	OSBPL10	Q9BXB5	764 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	CADM1	Q9BY67	442 aa	Known RBP	13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	CHST5	Q9GZS9	411 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	RIBC2	Q9H4K1	309 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	LINC00312	Q9Y6C7	94 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	SESN1	Q9Y6P5	492 aa		13.27	□□□□□ -0.29
DDR1-256	ENST00000505066	TRGV10	A0A0A0MS01	117 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066		A0A1W2PQL4	384 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	SH2D1B	O14796	132 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	MAGEB4	O15481	346 aa	Predicted RBP	13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	HAND1	O96004	215 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	CCL1	P22362	96 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	HTR1D	P28221	377 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	CEACAM3	P40198	252 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	POU3F4	P49335	361 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	ERVK11-1	P61568	191 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	KPNB1	Q14974	876 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	SPIN3	Q5JUX0	258 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	ZNF626	Q68DY1	528 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	C12orf73	Q69YU5	71 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	KCTD20	Q7Z5Y7	419 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	LHFPL4	Q7Z7J7	247 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	CATSPERD	Q86XM0	798 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	NDUFA11	Q86Y39	141 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	DNAAF1	Q8NEP3	725 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	OR11H6	Q8NGC7	330 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	CFHR4	Q92496	578 aa		13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	UTP4	Q969X6	686 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-256	ENST00000505066	CLEC7A	Q9BXN2	247 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 708.3 ms