RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 ESRRGP62508 458 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 IL5RAQ01344 420 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 CD69Q07108 199 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 KCNJ8Q15842 424 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 TAF9Q16594 264 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 ZNF684Q5T5D7 378 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 NXNL2Q5VZ03 156 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 PLCXD3Q63HM9 321 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 TMEM42Q69YG0 159 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 ZNF322Q6U7Q0 402 aaPredicted RBP3.96□□□□□ -1.78
CDH9-203ENST00000505045 MEPCEQ7L2J0 689 aaKnown RBP3.96□□□□□ -1.78
CDH9-203ENST00000505045 KRT74Q7RTS7 529 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 LYSMD2Q8IV50 215 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 PNLDC1Q8NA58 520 aaKnown RBP3.96□□□□□ -1.78
CDH9-203ENST00000505045 FAM81AQ8TBF8 368 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 TMEM163Q8TC26 289 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 NPRL2Q8WTW4 380 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 AQP3Q92482 292 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 H1FXQ92522 213 aaKnown RBP3.96□□□□□ -1.78
CDH9-203ENST00000505045 C12orf43Q96C57 262 aaKnown RBP3.96□□□□□ -1.78
CDH9-203ENST00000505045 MICU1Q9BPX6 476 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 DCTN5Q9BTE1 182 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 GABARAPL3Q9BY60 117 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 MROQ9BYG7 248 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 VCX3BQ9H321 246 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 RIBC2Q9H4K1 309 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 VCX3AQ9NNX9 186 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 GPR173Q9NS66 373 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 C19orf12Q9NSK7 152 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 CHCHD3Q9NX63 227 aaKnown RBP3.96□□□□□ -1.78
CDH9-203ENST00000505045 C1RLQ9NZP8 487 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 ZNRD1Q9P1U0 126 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 NLKQ9UBE8 527 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 IL36RNQ9UBH0 155 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 SLC25A10Q9UBX3 287 aaPredicted RBP3.96□□□□□ -1.78
CDH9-203ENST00000505045 PIGLQ9Y2B2 252 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 NOTCH3Q9UM47 2321 aa3.96□□□□□ -1.78
CDH9-203ENST00000505045 A0A1B0GVI7 797 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 A0A1W2PQL4 384 aaPredicted RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 LOC110117498-PIK3R3F6TDL0 507 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 EI24O14681 340 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 SIGLEC5O15389 551 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 NDUFA2O43678 99 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 GPR137BO60478 399 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 RPP14O95059 124 aaKnown RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 LY86O95711 162 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 GLRA1P23415 457 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 SAA4P35542 130 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 RANBP1P43487 201 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 KIR3DL2P43630 455 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 HAAOP46952 286 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 GABRA2P47869 451 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 MTNR1AP48039 350 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 RIDAP52758 137 aaKnown RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 RAG2P55895 527 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 GNG3P63215 75 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 COL10A1Q03692 680 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 ZNF85Q03923 595 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 SLC34A1Q06495 639 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 ZNF273Q14593 569 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 ZNF829Q3KNS6 432 aaPredicted RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 CEACAM21Q3KPI0 293 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 BCL2L15Q5TBC7 163 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 ATPAF1Q5TC12 328 aaPredicted RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 LCN1P1Q5VSP4 162 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 C16orf87Q6PH81 154 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 DEGS2Q6QHC5 323 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 MOB3CQ70IA8 216 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 TCF23Q7RTU1 214 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 SLC36A1Q7Z2H8 476 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 RNF144BQ7Z419 303 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 ANGPTL5Q86XS5 388 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 ELMOD2Q8IZ81 293 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 PRSS35Q8N3Z0 413 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 FTMTQ8N4E7 242 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 CD177Q8N6Q3 437 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 KIR3DL3Q8N743 410 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 TMEM185AQ8NFB2 350 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 OR10Z1Q8NGY1 313 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 C8orf46Q8TAG6 207 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 TRMT10AQ8TBZ6 339 aaKnown RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 RORBQ92753 470 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 EME1Q96AY2 570 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 DUS3LQ96G46 650 aaKnown RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 NR1H4Q96RI1 486 aaPredicted RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 ZMAT3Q9HA38 289 aaKnown RBP3.95□□□□□ -1.78
CDH9-203ENST00000505045 TRIM36Q9NQ86 728 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 CLN6Q9NWW5 311 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 AP4S1Q9Y587 144 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 KPTNQ9Y664 436 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 R4GMQ9 66 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 V9GYS6 101 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 DNAH3Q8TD57 4116 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 LOC107986453A0A1B0GWG9 222 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 PQLC2LA1A4F0 135 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 NKX6-3A6NJ46 265 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 OR5B21A6NL26 309 aa3.95□□□□□ -1.78
CDH9-203ENST00000505045 RFPL4AA6NLU0 287 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms