RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 BOD1Q96IK1 185 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 RGS11O94810 467 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 IGF2P01344 180 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 HPXP02790 462 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 F2RL1P55085 397 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 KLF3P57682 345 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-207ENST00000504761 SLC51BQ86UW2 128 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 PECRQ9BY49 303 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 DEPPQ9NTK1 212 aa12.31□□□□□ -0.44
TCOF1-207ENST00000504761 H3BP45 60 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 TOR1AO14656 332 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 SCAND1P57086 179 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 ZNF441Q8N8Z8 693 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 LILRB4Q8NHJ6 448 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 NXF2Q9GZY0 626 aaKnown RBP12.3□□□□□ -0.44
TCOF1-207ENST00000504761 MPDZO75970 2070 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 LOC102723996A0A087X1L8 192 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 TRBV5-5A0A0J9YX44 114 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 TUBG1P23258 451 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 GPR12P47775 334 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 MOGAT2Q3SYC2 334 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 CDH26Q8IXH8 852 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 PRR7Q8TB68 274 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 SOX7Q9BT81 388 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 TAAR3PQ9P1P4 343 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 FER1L5A0AVI2 2057 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 IGHV3-43A0A0B4J1X8 118 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 HLA-DQB1P01920 261 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
TCOF1-207ENST00000504761 UBA52P62987 128 aaKnown RBP12.3□□□□□ -0.44
TCOF1-207ENST00000504761 RELL2Q8NC24 303 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-207ENST00000504761 OR4D10Q8NGI6 311 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 ZNF703Q9H7S9 590 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-207ENST00000504761 HEATR5AQ86XA9 2040 aa12.3□□□□□ -0.44
TCOF1-207ENST00000504761 CXCL3P19876 107 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 BCL3P20749 454 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 C1orf87Q8N0U7 546 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 LRRC75AQ8NAA5 344 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 GPX8Q8TED1 209 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 GALMQ96C23 342 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 MPC1Q9Y5U8 109 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 S100A9P06702 114 aaKnown RBP12.29□□□□□ -0.44
TCOF1-207ENST00000504761 MICBQ29980 383 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 DUSP18Q8NEJ0 188 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 RND1Q92730 232 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-207ENST00000504761 TP53BP1Q12888 1972 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-207ENST00000504761 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 OR5B21A6NL26 309 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 PDZK1IP1Q13113 114 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 OR5AP2Q8NGF4 316 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 OR13C8Q8NGS7 320 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 ST7LQ8TDW4 575 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 PBDC1Q9BVG4 233 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 FAM117AQ9C073 453 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 ELF5Q9UKW6 265 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-207ENST00000504761 CEACAM1P13688 526 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 PRAMEF5Q5TYX0 476 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 PRAMEF6Q5VXH4 476 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 H2BFWTQ7Z2G1 175 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 FAM219AQ8IW50 185 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 RSPO3Q9BXY4 272 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-207ENST00000504761 FAM206AQ9NX38 181 aa12.29□□□□□ -0.44
TCOF1-207ENST00000504761 EFNA2O43921 213 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 NME2P1O60361 137 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 TSPAN9O75954 239 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 HES1Q14469 280 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 SLC25A38Q96DW6 304 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 SSSCA1O60232 199 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 TNFAIP6P98066 277 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 RAB31Q13636 194 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 SPANXN5Q5MJ07 72 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 ATPAF1Q5TC12 328 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 ZFP62Q8NB50 900 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 MRGPRDQ8TDS7 321 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 G6PC2Q9NQR9 355 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 ADAP1O75689 374 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 KRASP01116 189 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 HOXA1P49639 335 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 AKR1C1Q04828 323 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 ZNF816Q0VGE8 651 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 TEX30Q5JUR7 227 aa12.28□□□□□ -0.44
TCOF1-207ENST00000504761 RGP1Q92546 391 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-207ENST00000504761 CYTIPO60759 359 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 IAPPP10997 89 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 CEACAM6P40199 344 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 FAM74A1Q5RGS3 127 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 CPEB3Q8NE35 698 aaKnown RBP12.27□□□□□ -0.44
TCOF1-207ENST00000504761 CNTNAP3BQ96NU0 1288 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 GCM1Q9NP62 436 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 AK3Q9UIJ7 227 aa12.27□□□□□ -0.44
TCOF1-207ENST00000504761 NPIPB7O75200 414 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 TNFRSF1AP19438 455 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms