RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 OR5T2Q8NGG2 359 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 ANGPTL6Q8NI99 470 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 SLAMF9Q96A28 289 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 MSI2Q96DH6 328 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 GPER1Q99527 375 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 TCF7L1Q9HCS4 588 aa9.93□□□□□ -0.82
PDLIM5-208ENST00000504489 SONP18583 2426 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 HIVEP2P31629 2446 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 IGKV1-12A0A0C4DH73 117 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 MAGEA13PA6NCF6 341 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 A8MXK9 166 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 F8VVB4 439 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 F8VWA3 439 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 ADAM20O43506 726 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 ANGPTL7O43827 346 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 CD5LO43866 347 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 FOXH1O75593 365 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 KDM4BO94953 1096 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 LY6G6DO95868 133 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 KNG1P01042 644 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 IGKV1D-12P01611 117 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 MAS1P04201 325 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 SMIM18P0DKX4 95 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 TMEM225BP0DP42 221 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 CD37P11049 281 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 AMY2BP19961 511 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 LORP23490 312 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 FGF9P31371 208 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 PTGFRP43088 359 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 NPBWR2P48146 333 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 ESCO2Q56NI9 601 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 ZNF841Q6ZN19 808 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 ZNF788Q6ZQV5 615 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 SLC36A1Q7Z2H8 476 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 LYPD6Q86Y78 171 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 FAM58AQ8N1B3 248 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 PNLDC1Q8NA58 520 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 OR8B3Q8NGG8 313 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 OR5D18Q8NGL1 313 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 TNFAIP8L1Q8WVP5 186 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 MED30Q96HR3 178 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 OR8B2Q96RD0 313 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 SMR3AQ99954 134 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 SLITRK2Q9H156 845 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 SEBOXQ9HB31 216 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 SMURF1Q9HCE7 757 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 SNTG1Q9NSN8 517 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 CTSZQ9UBR2 303 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 ZNF222Q9UK12 451 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 STUB1Q9UNE7 303 aa9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 POLR3KQ9Y2Y1 108 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-208ENST00000504489 IGKV1D-17A0A075B6S4 117 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 TMPRSS2O15393 492 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 MSMBP08118 114 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 ADRA2CP18825 462 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 BCL3P20749 454 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 PITPNBP48739 271 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 NPY4RP50391 375 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 BMXP51813 675 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 SEC61A1P61619 476 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 ELP2Q6IA86 826 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 FIP1L1Q6UN15 594 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 CLEC9AQ6UXN8 241 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 C1QL2Q7Z5L3 287 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 Q8NFD4 153 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 EMG1Q92979 244 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 FOXRED1Q96CU9 486 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 SDSLQ96GA7 329 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 CCL13Q99616 98 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 UQCC2Q9BRT2 126 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 SSBP3Q9BWW4 388 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 HMG20AQ9NP66 347 aa9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 RBFOX1Q9NWB1 397 aaKnown RBP9.91□□□□□ -0.82
PDLIM5-208ENST00000504489 TRAV1-2A0A0B4J238 106 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 TRAV20A0A0B4J274 112 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 PPIAL4CA0A0B4J2A2 164 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 NKX6-3A6NJ46 265 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 RFPL4AA6NLU0 287 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 KIAA1324LA8MWY0 1029 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 RFPL4AL1F8VTS6 287 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 SIGLEC5O15389 551 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 TGFAP01135 160 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 SFTPBP07988 381 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 CD36P16671 472 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 CALRP27797 417 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 PRDX2P32119 198 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 OR3A4PP47883 348 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 MTNR1BP49286 362 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 DVL1P1P54792 670 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 GNB2P62879 340 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 IL13RA1P78552 427 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 ZNF146Q15072 292 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 C1orf100Q5SVJ3 147 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 WDR25Q64LD2 544 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 GLT8D1Q68CQ7 371 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 FAM166AQ6J272 317 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 BATF2Q8N1L9 274 aa9.9□□□□□ -0.82
PDLIM5-208ENST00000504489 JAGN1Q8N5M9 183 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms