RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 TRUB1Q8WWH5 349 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 H1FXQ92522 213 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 MTCH1Q9NZJ7 389 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 AASSQ9UDR5 926 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 GTF2A1LQ9UNN4 478 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 SLC1A7O00341 560 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNF737O75373 536 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 CRHBPP24387 322 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 EEF1B2P24534 225 aaKnown RBP11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 PRDX2P32119 198 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 SAA4P35542 130 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 SMIM21Q3B7S5 101 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 TP53I3Q53FA7 332 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 TCF23Q7RTU1 214 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 CMTM4Q8IZR5 234 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 RDH10Q8IZV5 341 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 BATF2Q8N1L9 274 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 TMEM185AQ8NFB2 350 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 CITED1Q99966 193 aa11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 METTL8Q9H825 291 aaKnown RBP11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 EXOGQ9Y2C4 368 aaKnown RBP11.41□□□□□ -0.58
PDLIM7-211ENST00000504318 A0A1B0GUS0 222 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 LOC107986453A0A1B0GWG9 222 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 H3BSH0 61 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 SYT7O43581 403 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 PROK1P58294 105 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 ERVFRD-1P60508 538 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNF273Q14593 569 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 OLFML2AQ68BL7 652 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 Q6ZSV7 163 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 RNF144BQ7Z419 303 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 MKXQ8IYA7 352 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 ENTHD1Q8IYW4 607 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNF561Q8N587 486 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 OR2G2Q8NGZ5 317 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 LINC01006Q8NI28 216 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 TRMT10AQ8TBZ6 339 aaKnown RBP11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 TBC1D15Q8TC07 691 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 ADAT3Q96EY9 351 aaPredicted RBP11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 Q96MT0 163 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 FRRS1LQ9P0K9 344 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 POLDIP2Q9Y2S7 368 aa11.4□□□□□ -0.58
PDLIM7-211ENST00000504318 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 CLPSL1A2RUU4 121 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 K7N7A8 449 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 CLPXO76031 633 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 KNG1P01042 644 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 TK1P04183 234 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 ISG15P05161 165 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 TFAP2AP05549 437 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 FBP1P09467 338 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 OR12D2P58182 307 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 ACSM1Q08AH1 577 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 LDLRAD2Q5SZI1 272 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 NCR3LG1Q68D85 454 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 CCDC54Q8NEL0 328 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 OR10AC1Q8NH08 325 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 OR4F5Q8NH21 305 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 RHOXF1Q8NHV9 184 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 CNIH3Q8TBE1 160 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 RFKQ969G6 155 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 C10orf35Q96D05 121 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 LGALS12Q96DT0 336 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 RNFT2Q96EX2 444 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 PELI1Q96FA3 418 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 FAM234AQ9H0X4 552 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 SEBOXQ9HB31 216 aaPredicted RBP11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 PLCXD1Q9NUJ7 323 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 IL36RNQ9UBH0 155 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 GNG8Q9UK08 70 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 VPREB3Q9UKI3 123 aa11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
PDLIM7-211ENST00000504318 A0A1W2PQ09 198 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 TMEM82A0PJX8 343 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 OR4C45A6NMZ5 311 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 WIPF1O43516 503 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 TSPAN9O75954 239 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 NXPH2O95156 264 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 UBCP0CG48 685 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 CCL3L1P16619 93 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 ALDH3B2P48448 385 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 RPL31P62899 125 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 C17orf107Q6ZR85 190 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 UTS2BQ765I0 119 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 FAM185AQ8N0U4 392 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 SVOPQ8N4V2 548 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 BEND2Q8NDZ0 799 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 BPIFB6Q8NFQ5 453 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 OR4M1Q8NGD0 313 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 OR51A4Q8NGJ6 313 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 PIFOQ8TCI5 191 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 APH1BQ8WW43 257 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 MEGF9Q9H1U4 602 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 C16orf95Q9H693 158 aa11.38□□□□□ -0.59
PDLIM7-211ENST00000504318 BEX1Q9HBH7 125 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms