RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 RASL12Q9NYN1 266 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 CLN8Q9UBY8 286 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 OR14J1Q9UGF5 321 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 KCNS2Q9ULS6 477 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 FOXJ3Q9UPW0 622 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 CUBNO60494 3623 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 TRAPPC2LH3BP13 241 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 DVL1O14640 695 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 FOXH1O75593 365 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 GPX5O75715 221 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 CYB5AP00167 134 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 GABRA5P31644 462 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 ZNF93P35789 620 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-205ENST00000503401 OR3A4PP47883 348 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 SNU13P55769 128 aaKnown RBP13.72□□□□□ -0.21
SCLT1-205ENST00000503401 WDR25Q64LD2 544 aaPredicted RBP13.72□□□□□ -0.21
SCLT1-205ENST00000503401 GLCCI1Q86VQ1 547 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 TSPAN14Q8NG11 270 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 TNFAIP8L1Q8WVP5 186 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 FCGR1BQ92637 280 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 EMG1Q92979 244 aaKnown RBP13.72□□□□□ -0.21
SCLT1-205ENST00000503401 GAFA1Q96PS6 74 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 ZNF222Q9UK12 451 aa13.72□□□□□ -0.21
SCLT1-205ENST00000503401 MXRA5Q9NR99 2828 aa13.71□□□□□ -0.21
SCLT1-205ENST00000503401 RGS9O75916 674 aaPredicted RBP13.71□□□□□ -0.22
SCLT1-205ENST00000503401 ALDOBP05062 364 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 SFTPBP07988 381 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 ACAA1P09110 424 aaPredicted RBP13.71□□□□□ -0.22
SCLT1-205ENST00000503401 DVL1P1P54792 670 aaPredicted RBP13.71□□□□□ -0.22
SCLT1-205ENST00000503401 ZNF788Q6ZQV5 615 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 CD177Q8N6Q3 437 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 ZNRF1Q8ND25 227 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 THRSPQ92748 146 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.22
SCLT1-205ENST00000503401 ELL3Q9HB65 397 aaPredicted RBP13.71□□□□□ -0.22
SCLT1-205ENST00000503401 NDUFB11Q9NX14 153 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 KAAG1Q9UBP8 84 aa13.71□□□□□ -0.22
SCLT1-205ENST00000503401 NF1P21359 2839 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 NKX6-3A6NJ46 265 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 A8MXK9 166 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 CCRL2O00421 344 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 CDRT1O95170 752 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 UCHL1P09936 223 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 PRKACAP17612 351 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 DUSP1P28562 367 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 TRAM1Q15629 374 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 DGUOKQ16854 277 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 HSD17B12Q53GQ0 312 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 ATPAF1Q5TC12 328 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-205ENST00000503401 FAHD2BQ6P2I3 314 aaPredicted RBP13.7□□□□□ -0.22
SCLT1-205ENST00000503401 IL17RELQ6ZVW7 336 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 SLC36A1Q7Z2H8 476 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 JAGN1Q8N5M9 183 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 OR10K1Q8NGX5 313 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 ST8SIA4Q92187 359 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 FAHD2AQ96GK7 314 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 ZNF696Q9H7X3 374 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 TCF7L1Q9HCS4 588 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 MAB21L2Q9Y586 359 aa13.7□□□□□ -0.22
SCLT1-205ENST00000503401 TRAV20A0A0B4J274 112 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 C22orf46C9J442 243 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 KDM4BO94953 1096 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 KNG1P01042 644 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 ADRA2CP18825 462 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 SRMP19623 302 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 PSMA1P25786 263 aaKnown RBP13.69□□□□□ -0.22
SCLT1-205ENST00000503401 PRDX2P32119 198 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 PTGFRP43088 359 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 IL13RA1P78552 427 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 FAM58AQ8N1B3 248 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 CPNE2Q96FN4 548 aaPredicted RBP13.69□□□□□ -0.22
SCLT1-205ENST00000503401 OR5V1Q9UGF6 321 aa13.69□□□□□ -0.22
SCLT1-205ENST00000503401 A0A087WXM4 84 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 SIGLEC5O15389 551 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 NDUFB3O43676 98 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 CR1LQ2VPA4 569 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 DCAF12L2Q5VW00 463 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 LRRTM1Q86UE6 522 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 Q8IYB0 196 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 SAXO1Q8IYX7 474 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 ZSCAN4Q8NAM6 433 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-205ENST00000503401 MUL1Q969V5 352 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 DNTTIP1Q9H147 329 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 CNTD2Q9H8S5 307 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 ING4Q9UNL4 249 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 GSTK1Q9Y2Q3 226 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 LOC105371242A0A075B767 164 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 CPT2P23786 658 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 CALRP27797 417 aaKnown RBP13.68□□□□□ -0.22
SCLT1-205ENST00000503401 NPY4RP50391 375 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 SYT6Q5T7P8 510 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-205ENST00000503401 BTN2A1Q7KYR7 527 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 PNLDC1Q8NA58 520 aaKnown RBP13.68□□□□□ -0.22
SCLT1-205ENST00000503401 TMEM185AQ8NFB2 350 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 PXT1Q8NFP0 134 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 SDSLQ96GA7 329 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 MED30Q96HR3 178 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 HMG20AQ9NP66 347 aa13.68□□□□□ -0.22
SCLT1-205ENST00000503401 SLC25A10Q9UBX3 287 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms