RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FAM72AQ5TYM5 149 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 LCN12Q6JVE5 192 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 FAM72DQ6L9T8 149 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 LRRN1Q6UXK5 716 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 FAM72BQ86X60 149 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 RIBC1Q8N443 379 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-224ENST00000497488 OR1N2Q8NGR9 330 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 RXFP2Q8WXD0 754 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 DDIT4LQ96D03 193 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 RDH12Q96NR8 316 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 OR5M11Q96RB7 305 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 F2RL3Q96RI0 385 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 SULT4A1Q9BR01 284 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 TMEM208Q9BTX3 173 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 NUDT9Q9BW91 350 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 UGT2B28Q9BY64 529 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 METTL9Q9H1A3 318 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 TAS2R13Q9NYV9 303 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 CTSZQ9UBR2 303 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF629Q9UEG4 869 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-224ENST00000497488 ANXA10Q9UJ72 324 aa4.65□□□□□ -1.67
BRCA1-224ENST00000497488 DOCK1Q14185 1865 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 AZIN1O14977 448 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 LYPLA1O75608 230 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 KBTBD11O94819 623 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 VENTXO95231 258 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 CTDNEP1O95476 244 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 PTHP01270 115 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 TYMSP04818 313 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 BCHEP06276 602 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 FABP1P07148 127 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 CTSLP07711 333 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 ERGP11308 486 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 FUT3P21217 361 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 ANOS1P23352 680 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 IDH3GP51553 393 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 FGF8P55075 233 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 ARPC4P59998 168 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 ERVFC1-1P60608 527 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 TOMM34Q15785 309 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 PRSS8Q16651 343 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 SLC25A35Q3KQZ1 300 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 TEX43Q6ZNM6 134 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 NOTCH2NLQ7Z3S9 236 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 FAM19A5Q7Z5A7 132 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 CPNE9Q8IYJ1 553 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 TMEM252Q8N6L7 170 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF680Q8NEM1 530 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 LRRC29Q8WV35 223 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 GEMIN6Q8WXD5 167 aaKnown RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 RAB8BQ92930 207 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 TESCQ96BS2 214 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 TLCD1Q96CP7 247 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 RNF185Q96GF1 192 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 GABARAPL3Q9BY60 117 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 SLIRPQ9GZT3 109 aaKnown RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 CLMPQ9H6B4 373 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 METTL17Q9H7H0 456 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 EXOSC4Q9NPD3 245 aaKnown RBP4.64□□□□□ -1.67
BRCA1-224ENST00000497488 SLC2A9Q9NRM0 540 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 AIG1Q9NVV5 245 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 OPN4Q9UHM6 478 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 CD84Q9UIB8 345 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 TP53TG1Q9Y2A0 90 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 ZSWIM8A7E2V4 1837 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 PHIPQ8WWQ0 1821 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 NAV1Q8NEY1 1877 aa4.64□□□□□ -1.67
BRCA1-224ENST00000497488 DENND4AQ7Z401 1863 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 IGHV3OR16-9A0A0B4J2B5 98 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 TMEM238C9JI98 176 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 F5H5K5 113 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 SOCS3O14543 225 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 XKRYO14609 159 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF253O75346 499 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 SLC22A5O76082 557 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 IGKV1D-16P01601 117 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 SEMG1P04279 462 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 IL6P05231 212 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 OR4E1P0C645 316 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 TAS2R19P59542 299 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 CACNG7P62955 275 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 BAXQ07812 192 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 CD300CQ08708 224 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 EGFEM1PQ0D2K5 195 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 SRSF6Q13247 344 aaKnown RBP4.63□□□□□ -1.67
BRCA1-224ENST00000497488 GUK1Q16774 197 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 C4orf26Q17RF5 130 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF630Q2M218 657 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF718Q3SXZ3 478 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF589Q86UQ0 364 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-224ENST00000497488 CALHM1Q8IU99 346 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 FAM71E2Q8N5Q1 922 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF614Q8N883 585 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 C11orf72Q8NBR9 251 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 OR13G1Q8NGZ3 307 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 NELFBQ8WX92 580 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 RGP1Q92546 391 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-224ENST00000497488 IL22RA2Q969J5 263 aa4.63□□□□□ -1.67
BRCA1-224ENST00000497488 ZNF501Q96CX3 271 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-224ENST00000497488 WFIKKN1Q96NZ8 548 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms