RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CCL3L1P16619 93 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 EPHA2P29317 976 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 HCCSP53701 268 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 ZNF273Q14593 569 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 KPNB1Q14974 876 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 BCL2L15Q5TBC7 163 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 NXNL2Q5VZ03 156 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 ZNF322Q6U7Q0 402 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 GDPD3Q7L5L3 318 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 Q8IYB0 196 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 ENTHD1Q8IYW4 607 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 TMEM163Q8TC26 289 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 MRAPQ8TCY5 172 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 PYDC1Q8WXC3 89 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 SGCDQ92629 289 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 C10orf35Q96D05 121 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 AKR1E2Q96JD6 320 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 GABARAPL3Q9BY60 117 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 H2AFY2Q9P0M6 372 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 SLC22A13Q9Y226 551 aa13.59□□□□□ -0.23
TRAPPC3-207ENST00000497251 hADV38S2A0JD32 116 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 PSMD9O00233 223 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 SRSF10O75494 262 aaKnown RBP13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 CCL1P22362 96 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 IL18R1Q13478 541 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 SSX2Q16385 188 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 NSUN5P1Q3KNT7 163 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 AADACL4Q5VUY2 407 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 MEPCEQ7L2J0 689 aaKnown RBP13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 LHFPL4Q7Z7J7 247 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 OR8H2Q8N162 312 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 TCEANCQ8N8B7 351 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 ASCC1Q8N9N2 400 aaKnown RBP13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 OR14K1Q8NGZ2 314 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 SNX22Q96L94 193 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 ZNF488Q96MN9 340 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 ZNF714Q96N38 554 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 OR14J1Q9UGF5 321 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 OR52A1Q9UKL2 312 aa13.58□□□□□ -0.24
TRAPPC3-207ENST00000497251 FAM90A22PA8MWA6 464 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 H3BNX3 289 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 F2RL2O00254 374 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 ZNF737O75373 536 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 GATBO75879 557 aaKnown RBP13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 SERPINA3P01011 423 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 CD28P10747 220 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 FUT6P51993 359 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 ARHGDIBP52566 201 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 COL10A1Q03692 680 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 OXLD1Q5BKU9 147 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 CCBE1Q6UXH8 406 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 ZNF782Q6ZMW2 699 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 GID4Q8IVV7 300 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 CEP19Q96LK0 163 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 MMP28Q9H239 520 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 GPR173Q9NS66 373 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 CLN6Q9NWW5 311 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 LINC00312Q9Y6C7 94 aa13.57□□□□□ -0.24
TRAPPC3-207ENST00000497251 A0A1B0GTI1 187 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 SAC3D1A6NKF1 404 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 ZNF670-ZNF695F2Z2N8 137 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 DUS4LO95620 317 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 MRPL3P09001 348 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 VDAC2P45880 294 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 EDDM3BP56851 147 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 CXCR4P61073 352 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 CD83Q01151 205 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 ARSJQ5FYB0 599 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 DMRTC1Q5HYR2 192 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 CITED2Q99967 270 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 PLEKHA1Q9HB21 404 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 GLS2Q9UI32 602 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 GTF2A1LQ9UNN4 478 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 COPS3Q9UNS2 423 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 SESN1Q9Y6P5 492 aa13.56□□□□□ -0.24
TRAPPC3-207ENST00000497251 DSCAML1Q8TD84 2053 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 ADARB2-AS1A8MUL3 147 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 ALPLP05186 524 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 PIPP12273 146 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 PEX2P28328 305 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 ERP29P30040 261 aaKnown RBP13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 RAB13P51153 203 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 MFGE8Q08431 387 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 DYNC1I2Q13409 638 aaKnown RBP13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 OR52W1Q6IF63 320 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 RTN4RL2Q86UN3 420 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 SLC35F2Q8IXU6 374 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 DYNAPQ8N1N2 210 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 OR8J1Q8NGP2 316 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 CREB3L1Q96BA8 519 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 PHF21AQ96BD5 680 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 IL4I1Q96RQ9 567 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 RIBC2Q9H4K1 309 aa13.55□□□□□ -0.24
TRAPPC3-207ENST00000497251 FUOMA2VDF0 154 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 PRR32B1ATL7 298 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 M0R129 80 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 SULT1C4O75897 302 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 KRT8P05787 483 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 CD33P20138 364 aa13.54□□□□□ -0.24
TRAPPC3-207ENST00000497251 PAX6P26367 422 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms