RNA–Protein interactions for RNA: ENST00000496298.5

USP40-217, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-217ENST00000496298 DLX6P56179 175 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 ACTA2P62736 377 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 ACTG2P63267 376 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 ZNF91Q05481 1191 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 GALEQ14376 348 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 SLC25A26Q70HW3 274 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 MKXQ8IYA7 352 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 Q8IYB0 196 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 BATF2Q8N1L9 274 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 PQLC1Q8N2U9 271 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 OR5R1Q8NH85 324 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 Q96MT0 163 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 ZNF649Q9BS31 505 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 HEXA-AS1Q9H8Q6 139 aa15.81■□□□□ 0.12
USP40-217ENST00000496298 PAHP00439 452 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 IGHA1P01876 353 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 HTR1AP08908 422 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 DBTP11182 482 aaKnown RBP15.8■□□□□ 0.12
USP40-217ENST00000496298 ATF1P18846 271 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 PRKACBP22694 351 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 ATP1B3P54709 279 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 COL10A1Q03692 680 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 ZBTB49Q6ZSB9 765 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 SYS1Q8N2H4 156 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 OR4M1Q8NGD0 313 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 LINC01006Q8NI28 216 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 SLAMF9Q96A28 289 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 FGGYQ96C11 551 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 MRPL48Q96GC5 212 aaKnown RBP15.8■□□□□ 0.12
USP40-217ENST00000496298 C4orf36Q96KX1 117 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 MYCBPQ99417 103 aaPredicted RBP15.8■□□□□ 0.12
USP40-217ENST00000496298 MEGF9Q9H1U4 602 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 C16orf95Q9H693 158 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 MRPS18AQ9NVS2 196 aaKnown RBP15.8■□□□□ 0.12
USP40-217ENST00000496298 FAM118AQ9NWS6 357 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 HHLA2Q9UM44 414 aa15.8■□□□□ 0.12
USP40-217ENST00000496298 LOC100130705A0A1B0GUX0 176 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 hCG_1809904A0A1W2PP81 198 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 A0A1W2PPE2 198 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 A0A1W2PR64 198 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 A0A1W2PRV1 198 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 BTBD17A6NE02 478 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 C17orf98A8MV24 154 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 J3QLW9 94 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 ANGPTL7O43827 346 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 MT-ND2P03891 347 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 CCL3L1P16619 93 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 ZNF19P17023 458 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 ALKBH1Q13686 389 aaKnown RBP15.79■□□□□ 0.12
USP40-217ENST00000496298 ZNF273Q14593 569 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 AANATQ16613 207 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 OR10AC1Q8NH08 325 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 C17orf50Q8WW18 174 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 SPSB1Q96BD6 273 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 SNX22Q96L94 193 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 CITED1Q99966 193 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 INPP5EQ9NRR6 644 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 MYRFQ9Y2G1 1151 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 MEGF8Q7Z7M0 2845 aa15.79■□□□□ 0.12
USP40-217ENST00000496298 TRBV2A0A0J9YWF9 115 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 TSPAN9O75954 239 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 CLPXO76031 633 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 FADS2O95864 444 aaKnown RBP15.78■□□□□ 0.12
USP40-217ENST00000496298 RBP4P02753 201 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 AZGP1P25311 298 aaKnown RBP15.78■□□□□ 0.12
USP40-217ENST00000496298 MTCP1P56278 107 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 PROK1P58294 105 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 RAB40BQ12829 278 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 Q6ZSV7 163 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 LHFPL2Q6ZUX7 228 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 LHFPL3Q86UP9 236 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 OR8H2Q8N162 312 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 ASCC1Q8N9N2 400 aaKnown RBP15.78■□□□□ 0.12
USP40-217ENST00000496298 OR51A4Q8NGJ6 313 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 ALG8Q9BVK2 526 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 ERVK13-1Q9NX77 482 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 RNF114Q9Y508 228 aa15.78■□□□□ 0.12
USP40-217ENST00000496298 TMEM82A0PJX8 343 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 RPSAP08865 295 aaKnown RBP15.77■□□□□ 0.12
USP40-217ENST00000496298 ZNF20P17024 532 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 TGFBR2P37173 567 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 NPBWR2P48146 333 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 ERVFRD-1P60508 538 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 MEF2CQ06413 473 aaPredicted RBP15.77■□□□□ 0.12
USP40-217ENST00000496298 SRSF4Q08170 494 aaKnown RBP15.77■□□□□ 0.12
USP40-217ENST00000496298 PDZK1IP1Q13113 114 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 ZNF146Q15072 292 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 C17orf107Q6ZR85 190 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 FAM58AQ8N1B3 248 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 EMG1Q92979 244 aaKnown RBP15.77■□□□□ 0.12
USP40-217ENST00000496298 RDH12Q96NR8 316 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 OPALINQ96PE5 141 aa15.77■□□□□ 0.12
USP40-217ENST00000496298 ISG20L2Q9H9L3 353 aaKnown RBP15.77■□□□□ 0.12
USP40-217ENST00000496298 VWFP04275 2813 aa15.76■□□□□ 0.11
USP40-217ENST00000496298 FAM90A8PA6NJQ4 464 aa15.76■□□□□ 0.11
USP40-217ENST00000496298 ALX3O95076 343 aa15.76■□□□□ 0.11
USP40-217ENST00000496298 HAND1O96004 215 aa15.76■□□□□ 0.11
USP40-217ENST00000496298 CYB5AP00167 134 aa15.76■□□□□ 0.11
USP40-217ENST00000496298 ZNF728P0DKX0 622 aa15.76■□□□□ 0.11
USP40-217ENST00000496298 KRTAP10-3P60369 221 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms