RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 DPY19L4Q7Z388 723 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 LNX2Q8N448 690 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 TMEM185AQ8NFB2 350 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 OR13C2Q8NGS9 318 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 SGTBQ96EQ0 304 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 CDRT15Q96T59 188 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 ZNF426Q9BUY5 554 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 TPPP3Q9BW30 176 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 MEPEQ9NQ76 525 aaPredicted RBP7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 HAO2Q9NYQ3 351 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 USE1Q9NZ43 259 aa7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 SIRT4Q9Y6E7 314 aaPredicted RBP7.56□□□□□ -1.2
SMARCAL1-213ENST00000496037 ALDOCP09972 364 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 AREGP15514 252 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 F2RL1P55085 397 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 LSM6P62312 80 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 SLC35B1P78383 322 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 CDK6Q00534 326 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 SPIBQ01892 262 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 SNAPC1Q16533 368 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 DEFB136Q30KP8 78 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 GCNT6Q5T4J0 391 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 OTPQ5XKR4 325 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 WDR82Q6UXN9 313 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 Q6ZNX1 250 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 PATL1Q86TB9 770 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 C4orf33Q8N1A6 199 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 RPP25LQ8N5L8 163 aaKnown RBP7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 GJC3Q8NFK1 279 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 OR13D1Q8NGV5 346 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 NPIPB3Q92617 1050 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 ATF6BQ99941 703 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 SIKE1Q9BRV8 207 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 SLC25A33Q9BSK2 321 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 PLGRKTQ9HBL7 147 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 ING3Q9NXR8 418 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 A4GNTQ9UNA3 340 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 LRP12Q9Y561 859 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 HILPDAQ9Y5L2 63 aa7.55□□□□□ -1.2
SMARCAL1-213ENST00000496037 ODF3BA8MYP8 253 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 F5H5K5 113 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 XKRYO14609 159 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 LYPD3O95274 346 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 TFF1P04155 84 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 IL6P05231 212 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 ACAA1P09110 424 aaPredicted RBP7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 ACSM4P0C7M7 580 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 FAM90A13PP0C7W8 464 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 FAM90A24PP0C7X0 464 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 GP9P14770 177 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 CTLA4P16410 223 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 GALP22466 123 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 IL12AP29459 219 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 AQP1P29972 269 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 GABRA2P47869 451 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 ENTPD1P49961 510 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 CSNK2BP67870 215 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 FHL3Q13643 280 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 SRSF7Q16629 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 AADACL4Q5VUY2 407 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 COMMD1Q8N668 190 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 SLC24A4Q8NFF2 622 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 OR1M1Q8NGA1 313 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 OR6T1Q8NGN1 323 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 PFN4Q8NHR9 129 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 CHPT1Q8WUD6 406 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 ITCHQ96J02 903 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 NSMCE2Q96MF7 247 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 C19orf12Q9NSK7 152 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 MBNL3Q9NUK0 354 aaKnown RBP7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 ADA2Q9NZK5 511 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 FAM30AQ9NZY2 134 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 STEAP1Q9UHE8 339 aa7.54□□□□□ -1.2
SMARCAL1-213ENST00000496037 DYNC1H1Q14204 4646 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 ANKRD30BLA7E2S9 258 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 USP17L23D6RBM5 183 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 M0QZK8 103 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 CLIC1O00299 241 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 CDIPTO14735 213 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 DENRO43583 198 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 MTRF1O75570 445 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 RLN1P04808 185 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 TSPAN19P0C672 248 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 SMIM18P0DKX4 95 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 IGHV4-30-4P0DP06 118 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 HSPA13P48723 471 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 IL18R1Q13478 541 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 ALKBH1Q13686 389 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 ZNF626Q68DY1 528 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 ZNF770Q6IQ21 691 aaPredicted RBP7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 CFAP77Q6ZQR2 320 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 C11orf53Q8IXP5 236 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 SLC15A3Q8IY34 581 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 ANGPTL6Q8NI99 470 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 NDNFQ8TB73 568 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 KRTAP9-2Q9BYQ4 174 aa7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 RBM38Q9H0Z9 239 aaKnown RBP7.53□□□□□ -1.2
SMARCAL1-213ENST00000496037 WDR13Q9H1Z4 485 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms