RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 A0A1B0GV50 99 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 SYNGR3O43761 229 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 CA11O75493 328 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 ONECUT2O95948 504 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 COX6A1P12074 109 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 FKBP2P26885 142 aaKnown RBP11.3□□□□□ -0.6
PTPN7-217ENST00000495688 CHATP28329 748 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 TMEM187Q14656 261 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 ARL6IP1Q15041 203 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 SWI5Q1ZZU3 235 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 MIDNQ504T8 468 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 SLC22A25Q6T423 547 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 YRDCQ86U90 279 aaKnown RBP11.3□□□□□ -0.6
PTPN7-217ENST00000495688 FBXL14Q8N1E6 418 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 TMEM156Q8N614 296 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 MR1Q95460 341 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 IMMP1LQ96LU5 166 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 ANGPTL4Q9BY76 406 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 ZDHHC8Q9ULC8 765 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 HS3ST3B1Q9Y662 390 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 KLF7O75840 302 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-217ENST00000495688 VAMP5O95183 116 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 HEXAP06865 529 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 CCL4P13236 92 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF32P17041 273 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 DVL1P1P54792 670 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-217ENST00000495688 STARD6P59095 220 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 EIF3IQ13347 325 aaKnown RBP11.3□□□□□ -0.6
PTPN7-217ENST00000495688 ABCA11PQ4W5N1 156 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 OPN5Q6U736 354 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 TDHQ8IZJ6 230 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 C20orf24Q9BUV8 137 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 NAA60Q9H7X0 242 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 NECAP2Q9NVZ3 263 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 CACFD1Q9UGQ2 172 aa11.3□□□□□ -0.6
PTPN7-217ENST00000495688 A0A087WZY1 265 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
PTPN7-217ENST00000495688 CXCL12P48061 93 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 RBP2P50120 134 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 MRPS34P82930 218 aaKnown RBP11.29□□□□□ -0.6
PTPN7-217ENST00000495688 NHLH2Q02577 135 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 PPA1Q15181 289 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 SPSB1Q96BD6 273 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 C14orf79Q96F83 325 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 BORCS8Q96FH0 119 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 COA4Q9NYJ1 87 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-217ENST00000495688 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 DAOP14920 347 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 RTL6Q6ICC9 239 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 UBAC2Q8NBM4 344 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 ISOC2Q96AB3 205 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 IP6K3Q96PC2 410 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 NAA11Q9BSU3 229 aaPredicted RBP11.29□□□□□ -0.6
PTPN7-217ENST00000495688 DUSP23Q9BVJ7 150 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 BIN3Q9NQY0 253 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 KCNIP3Q9Y2W7 256 aa11.29□□□□□ -0.6
PTPN7-217ENST00000495688 LOC102723996A0A087X1L8 192 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 TSPAN15O95858 294 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 ECI1P42126 302 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 HTR5AP47898 357 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 SSR4P51571 173 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 FAM3AP98173 230 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 HLA-BQ31612 363 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 HSD17B11Q8NBQ5 300 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 OR1F12Q8NHA8 337 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 C10orf35Q96D05 121 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 EDARQ9UNE0 448 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 ST3GAL6Q9Y274 331 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 NRASP01111 189 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 APOC1P02654 83 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 RAC1P63000 192 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 ZNF92Q03936 586 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 RAB35Q15286 201 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 MEX3BQ6ZN04 569 aaKnown RBP11.28□□□□□ -0.6
PTPN7-217ENST00000495688 DMBX1Q8NFW5 382 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 LYPD6BQ8NI32 183 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 RPS10P5Q9NQ39 176 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 P4HTMQ9NXG6 502 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 HSF4Q9ULV5 492 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 AHCTF1Q8WYP5 2266 aa11.28□□□□□ -0.6
PTPN7-217ENST00000495688 URB1O60287 2271 aaKnown RBP11.27□□□□□ -0.6
PTPN7-217ENST00000495688 E5RGE8 158 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 IGHV3-9P01782 118 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 PSG4Q00888 419 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 HABP2Q14520 560 aaPredicted RBP11.27□□□□□ -0.6
PTPN7-217ENST00000495688 RPS19BP1Q86WX3 136 aaKnown RBP11.27□□□□□ -0.6
PTPN7-217ENST00000495688 CALHM1Q8IU99 346 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 OSR2Q8N2R0 312 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 GPR137CQ8N3F9 429 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 SFT2D1Q8WV19 159 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 MSI2Q96DH6 328 aaKnown RBP11.27□□□□□ -0.6
PTPN7-217ENST00000495688 SCRT1Q9BWW7 348 aa11.27□□□□□ -0.6
PTPN7-217ENST00000495688 NSG2Q9Y328 171 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms