RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 AASSQ9UDR5 926 aa9.43□□□□□ -0.9
VTI1A-208ENST00000494728 WARS2Q9UGM6 360 aaKnown RBP9.43□□□□□ -0.9
VTI1A-208ENST00000494728 POLDIP2Q9Y2S7 368 aa9.43□□□□□ -0.9
VTI1A-208ENST00000494728 IGKV1-9A0A0C4DH69 117 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 C17orf98A8MV24 154 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 IGHA1P01876 353 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 CALCBP10092 127 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 GABRA5P31644 462 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 NPBWR2P48146 333 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 RAB13P51153 203 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 NANOS3P60323 173 aaKnown RBP9.42□□□□□ -0.9
VTI1A-208ENST00000494728 HABP2Q14520 560 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-208ENST00000494728 CCBE1Q6UXH8 406 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-208ENST00000494728 SLC25A26Q70HW3 274 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 TPRX1Q8N7U7 411 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 FAM110DQ8TAY7 271 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-208ENST00000494728 PYDC1Q8WXC3 89 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 RBFOX1Q9NWB1 397 aaKnown RBP9.42□□□□□ -0.9
VTI1A-208ENST00000494728 USE1Q9NZ43 259 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 FBLN5Q9UBX5 448 aa9.42□□□□□ -0.9
VTI1A-208ENST00000494728 FAM90A8PA6NJQ4 464 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 E9PQ18 207 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 H3BNX3 289 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 J3QRE1 110 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 PSPNO60542 156 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 OR2T7P0C7T2 308 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 EDDM3BP56851 147 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 FBLN7Q53RD9 439 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 BAIAP2L2Q6UXY1 529 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 TMEM219Q86XT9 240 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 KLHDC1Q8N7A1 406 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 OR52N4Q8NGI2 321 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 OR51A4Q8NGJ6 313 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 OR8J1Q8NGP2 316 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 CEP19Q96LK0 163 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 CHST6Q9GZX3 395 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 FAM234AQ9H0X4 552 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 ZNF702PQ9H963 129 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 GNG8Q9UK08 70 aa9.41□□□□□ -0.9
VTI1A-208ENST00000494728 EI24O14681 340 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 ENTPD6O75354 484 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 SULT1C4O75897 302 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 ALPLP05186 524 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 FCGR1AP12314 374 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 BCL3P20749 454 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 DUSP1P28562 367 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
VTI1A-208ENST00000494728 OR12D2P58182 307 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 ACTR3P61158 418 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 ZNF91Q05481 1191 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 EDDM3AQ14507 147 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 AANATQ16613 207 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 C2orf68Q2NKX9 166 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 ZNF626Q68DY1 528 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 Q6ZS46 218 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 OR8H2Q8N162 312 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 LYG1Q8N1E2 194 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 OR4C13Q8NGP0 309 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 OR2G2Q8NGZ5 317 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 CFHR4Q92496 578 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 EMG1Q92979 244 aaKnown RBP9.4□□□□□ -0.9
VTI1A-208ENST00000494728 CENPNQ96H22 339 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-208ENST00000494728 HEXA-AS1Q9H8Q6 139 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 ENOPH1Q9UHY7 261 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 SLC7A11Q9UPY5 501 aa9.4□□□□□ -0.9
VTI1A-208ENST00000494728 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 VGLL3A8MV65 326 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 GATBO75879 557 aaKnown RBP9.39□□□□□ -0.91
VTI1A-208ENST00000494728 MMP23AO75900 390 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 HAND1O96004 215 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 ARG1P05089 322 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 UBCP0CG48 685 aaKnown RBP9.39□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF728P0DKX0 622 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 KIR2DS4P43632 304 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 OR3A1P47881 315 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 POU3F4P49335 361 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 FUT6P51993 359 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 HERPUD1Q15011 391 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 TMEM95Q3KNT9 176 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 ZIK1Q3SY52 487 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-208ENST00000494728 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 RFT1Q96AA3 541 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 RNFT2Q96EX2 444 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 BORCS8Q96FH0 119 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 SPACA5Q96QH8 159 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 MBOAT4Q96T53 435 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 RANBP3Q9H6Z4 567 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-208ENST00000494728 SERTAD4Q9NUC0 356 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 FRRS1LQ9P0K9 344 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
VTI1A-208ENST00000494728 TCF19Q9Y242 345 aa9.39□□□□□ -0.91
VTI1A-208ENST00000494728 TRBV2A0A0J9YWF9 115 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 A0A1W2PPH5 198 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 A6NDX4 124 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 G3V4G9 280 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 CHRM2P08172 466 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 CSF1P09603 554 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 AZGP1P25311 298 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms