RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 NKX3-1Q99801 234 aaPredicted RBP6.21□□□□□ -1.42
EPHA3-203ENST00000494014 C20orf144Q9BQM9 153 aa6.21□□□□□ -1.42
EPHA3-203ENST00000494014 SH3BGRL3Q9H299 93 aa6.21□□□□□ -1.42
EPHA3-203ENST00000494014 GRHPRQ9UBQ7 328 aa6.21□□□□□ -1.42
EPHA3-203ENST00000494014 AK3Q9UIJ7 227 aa6.21□□□□□ -1.42
EPHA3-203ENST00000494014 CHTOPQ9Y3Y2 248 aaKnown RBP6.21□□□□□ -1.42
EPHA3-203ENST00000494014 LIPGQ9Y5X9 500 aa6.21□□□□□ -1.42
EPHA3-203ENST00000494014 HS3ST3A1Q9Y663 406 aa6.21□□□□□ -1.42
EPHA3-203ENST00000494014 ASCC3Q8N3C0 2202 aaKnown RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 A8MVM7 634 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 ATXN7O15265 892 aaPredicted RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 TCF21O43680 179 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 ISG15P05161 165 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 CPMP14384 443 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 CSNK1A1P48729 337 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 EMDP50402 254 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 QRFPP83859 136 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 FOXF1Q12946 379 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 SGCGQ13326 291 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 PCK2Q16822 640 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 LEMD1Q68G75 181 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 DPPA3Q6W0C5 159 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 LSRQ86X29 649 aaPredicted RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 SLC22A24Q8N4F4 322 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 ARHGEF39Q8N4T4 335 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 LINC01555Q8NAE3 123 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 AGBL5Q8NDL9 886 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 SLC24A4Q8NFF2 622 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 OR13G1Q8NGZ3 307 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 TMEM170AQ8WVE7 144 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 NUS1Q96E22 293 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 DIRC2Q96SL1 478 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 MIEN1Q9BRT3 115 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 APOBEC3BQ9UH17 382 aaKnown RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 NAGKQ9UJ70 344 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 POLR3KQ9Y2Y1 108 aaPredicted RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 ATG2BQ96BY7 2078 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 A0A1B0GV50 99 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 CDC14CA4D256 554 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 SCGB1D1O95968 90 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 PNPP00491 289 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 IRF2P14316 349 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 PI3P19957 117 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 AMY2BP19961 511 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 PTGER4P35408 488 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 OR5I1Q13606 314 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 PMS2P11Q13670 270 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 TRMT12Q53H54 448 aaKnown RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 SP5Q6BEB4 398 aaPredicted RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 ARMC6Q6NXE6 501 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 LRRC69Q6ZNQ3 347 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 OR2G3Q8NGZ4 309 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 HAS2Q92819 552 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 THOC3Q96J01 351 aaKnown RBP6.2□□□□□ -1.42
EPHA3-203ENST00000494014 AMELYQ99218 206 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 ZNF700Q9H0M5 742 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 CNTD2Q9H8S5 307 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 DNAJC4Q9NNZ3 241 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 PCNX2A6NKB5 2137 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 FRYLO94915 3013 aa6.2□□□□□ -1.42
EPHA3-203ENST00000494014 NSG1A0A0A6YYJ2 146 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 TMEM14DPA8MWL7 114 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 ETV2O00321 342 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 NKX2-2O95096 273 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 SCGB1D2O95969 90 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 HPRT1P00492 218 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 STATHP02808 62 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 MMP7P09237 267 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 VSIG8P0DPA2 414 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 HIST1H1DP16402 221 aaKnown RBP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 HNF1AP20823 631 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 GLRA1P23415 457 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 CD38P28907 300 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 GABRA3P34903 492 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 DRD3P35462 400 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 TNFSF10P50591 281 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 RAB28P51157 221 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 EMP2P54851 167 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 KLF3P57682 345 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 RAB38P57729 211 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 FAM3BP58499 235 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 VAMP2P63027 116 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 BTN3A2P78410 334 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 CCL20P78556 96 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 DPTQ07507 201 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 TRA2AQ13595 282 aaKnown RBP eCLIP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 SMIM15Q7Z3B0 74 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 NUFIP2Q7Z417 695 aaKnown RBP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 IFI44Q8TCB0 444 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 LPAR4Q99677 370 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 MSL2Q9HCI7 577 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 GPR84Q9NQS5 396 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 SLC5A6Q9Y289 635 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 NCOR2Q9Y618 2525 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 LOC107986453A0A1B0GWG9 222 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 H0Y8X5 98 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 K7EP13 123 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 CA11O75493 328 aa6.19□□□□□ -1.42
EPHA3-203ENST00000494014 MBPP02686 304 aaPredicted RBP6.19□□□□□ -1.42
EPHA3-203ENST00000494014 GPR3P46089 330 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms