RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 MFSD14CQ5VZR4 134 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 Q6ZSR6 202 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 OR4M1Q8NGD0 313 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 ADTRPQ96IZ2 230 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 COPS4Q9BT78 406 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 COA1Q9GZY4 146 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 TREM1Q9NP99 234 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 CLEC2DQ9UHP7 191 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 SLC7A11Q9UPY5 501 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 AP3M1Q9Y2T2 418 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 ACOT9Q9Y305 439 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 TRPM1Q7Z4N2 1603 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 POLR3AO14802 1390 aaPredicted RBP3.82□□□□□ -1.8
SMC2-205ENST00000493955 IGHV7-4-1A0A0J9YVY3 117 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 GOLGA8QA0A0J9YX86 632 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 J3QT63 122 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 RPN2P04844 631 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 ZNF806P0C7X5 589 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 ME2P23368 584 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 SPAM1P38567 509 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 OPRK1P41145 380 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 RANBP1P43487 201 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 CXCL12P48061 93 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 CD151P48509 253 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 C2orf80Q0P641 193 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 CDNFQ49AH0 187 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 ACTL10Q5JWF8 245 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 GUSBP11Q6P575 273 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 SETD3Q86TU7 594 aaPredicted RBP3.81□□□□□ -1.8
SMC2-205ENST00000493955 UBALD2Q8IYN6 164 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 TTLQ8NG68 377 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 DOK4Q8TEW6 326 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 CCDC124Q96CT7 223 aaKnown RBP3.81□□□□□ -1.8
SMC2-205ENST00000493955 CIB1Q99828 191 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 PDCD1LG2Q9BQ51 273 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 RHBDL2Q9NX52 303 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 TFR2Q9UP52 801 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 WIF1Q9Y5W5 379 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 OVOS2A0A0G2JMS6 1433 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 OVOS2A0A0J9YW53 1432 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 OVOS2Q6IE36 1432 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 LY75O60449 1722 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 NFAT5O94916 1531 aa3.81□□□□□ -1.8
SMC2-205ENST00000493955 TRAV8-6A0A0B4J262 113 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 CST4P01036 141 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 P2RY2P41231 377 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 CRB1P82279 1406 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 SLC25A35Q3KQZ1 300 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 ZNF691Q5VV52 312 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 AP1ARQ63HQ0 302 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 OR2L8Q8NGY9 312 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 OR1L1Q8NH94 360 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 LINC01560Q8TB33 94 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 CIRBP-AS1Q8TBR5 109 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 NT5CQ8TCD5 201 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 C18orf15Q96N68 181 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 CDX2Q99626 313 aaPredicted RBP3.8□□□□□ -1.8
SMC2-205ENST00000493955 BEX2Q9BXY8 128 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 GOLPH3Q9H4A6 298 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 WDR55Q9H6Y2 383 aaPredicted RBP3.8□□□□□ -1.8
SMC2-205ENST00000493955 EXOSC4Q9NPD3 245 aaKnown RBP3.8□□□□□ -1.8
SMC2-205ENST00000493955 PPIL1Q9Y3C6 166 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 TOGARAM1Q9Y4F4 1720 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 FAM208AQ9UK61 1670 aaKnown RBP3.8□□□□□ -1.8
SMC2-205ENST00000493955 CPDO75976 1380 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 RAB3GAP2Q9H2M9 1393 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 TMEM131Q92545 1883 aa3.8□□□□□ -1.8
SMC2-205ENST00000493955 CPSF1Q10570 1443 aaKnown RBP3.79□□□□□ -1.8
SMC2-205ENST00000493955 PPIP5K1Q6PFW1 1433 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 TAF1LQ8IZX4 1826 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 GATBO75879 557 aaKnown RBP3.79□□□□□ -1.8
SMC2-205ENST00000493955 PAX6P26367 422 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 VSNL1P62760 191 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 DMTNQ08495 405 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 PRSS8Q16651 343 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 YIF1BQ5BJH7 314 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 TEX30Q5JUR7 227 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 HHATQ5VTY9 493 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 RESP18Q5W5W9 173 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 FAM71E1Q6IPT2 247 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 ZFP1Q6P2D0 407 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 ERO1BQ86YB8 467 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 DRAXINQ8NBI3 349 aaPredicted RBP3.79□□□□□ -1.8
SMC2-205ENST00000493955 SFXN5Q8TD22 340 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 TMEM239Q8WW34 195 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 ALS2CR12Q96Q35 445 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 TBL1YQ9BQ87 522 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 ACOT13Q9NPJ3 140 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 NECAP2Q9NVZ3 263 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 NXT1Q9UKK6 140 aaKnown RBP3.79□□□□□ -1.8
SMC2-205ENST00000493955 LRRC42Q9Y546 428 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 ABCC6O95255 1503 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 EIF3AQ14152 1382 aaKnown RBP3.79□□□□□ -1.8
SMC2-205ENST00000493955 TNS2Q63HR2 1409 aa3.79□□□□□ -1.8
SMC2-205ENST00000493955 IGHV6-1A0A0B4J1U7 121 aa3.78□□□□□ -1.8
SMC2-205ENST00000493955 POLR3GO15318 223 aaPredicted RBP3.78□□□□□ -1.8
SMC2-205ENST00000493955 ENSAO43768 121 aaKnown RBP3.78□□□□□ -1.8
SMC2-205ENST00000493955 CCDC22O60826 627 aa3.78□□□□□ -1.8
SMC2-205ENST00000493955 IGLV3-25P01717 112 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms