RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 RAB2BQ8WUD1 216 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 NEIL1Q96FI4 390 aaPredicted RBP6.37□□□□□ -1.39
VEGFA-214ENST00000493786 MED30Q96HR3 178 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 NKX3-1Q99801 234 aaPredicted RBP6.37□□□□□ -1.39
VEGFA-214ENST00000493786 TMEM246Q9BRR3 403 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 DNTTIP1Q9H147 329 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 WDR13Q9H1Z4 485 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 ZNF665Q9H7R5 613 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 TMEM165Q9HC07 324 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 HES4Q9HCC6 221 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 HMG20AQ9NP66 347 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 IL36GQ9NZH8 169 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 STEAP1Q9UHE8 339 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 CSMD2Q7Z408 3487 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 DYSFO75923 2080 aa6.37□□□□□ -1.39
VEGFA-214ENST00000493786 IGHV4-61A0A0C4DH41 118 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 IGKV1-12A0A0C4DH73 117 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 SMIM30A4D0T7 59 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 RFPL4AA6NLU0 287 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 IFITM5A6NNB3 132 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 RFPL4AL1F8VTS6 287 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 H3BUI4 141 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 H7C1Q1 480 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 AIPO00170 330 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 SLC22A1O15245 554 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 TMPRSS2O15393 492 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 NDUFB3O43676 98 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 GABARAPO95166 117 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 BPNT1O95861 308 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 HAND1O96004 215 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 IL1AP01583 271 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 IGKV1D-12P01611 117 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 IGHV2-5P01817 119 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 CHRM2P08172 466 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 CALCBP10092 127 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 PSG2P11465 335 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 ZNF44P15621 663 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 ARSBP15848 533 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 PRDX2P32119 198 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 RBMXP38159 391 aaKnown RBP6.36□□□□□ -1.39
VEGFA-214ENST00000493786 NPBWR2P48146 333 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 SERPINB10P48595 397 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 PITPNBP48739 271 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 NPY4RP50391 375 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 TMBIM6P55061 237 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 OR10A3P58181 314 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 FGF12P61328 243 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 VBP1P61758 197 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 GNB2P62879 340 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 IL13RA1P78552 427 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 HOXA4Q00056 320 aaPredicted RBP6.36□□□□□ -1.39
VEGFA-214ENST00000493786 P2RY14Q15391 338 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 LRRC10Q5BKY1 277 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 HES5Q5TA89 166 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 STUMQ69YW2 141 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 ELP2Q6IA86 826 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 SPNS3Q6ZMD2 512 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 USP43Q70EL4 1123 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 RNF144BQ7Z419 303 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 LINC00596Q86U02 117 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 ZNF561Q8N587 486 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 ASCC1Q8N9N2 400 aaKnown RBP6.36□□□□□ -1.39
VEGFA-214ENST00000493786 OR4D6Q8NGJ1 314 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 OR10K1Q8NGX5 313 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 KCNG3Q8TAE7 436 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 PPP1R35Q8TAP8 253 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 SEH1LQ96EE3 360 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 MRPS24Q96EL2 167 aaKnown RBP6.36□□□□□ -1.39
VEGFA-214ENST00000493786 CCL13Q99616 98 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 BCL7BQ9BQE9 202 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 TMEM59Q9BXS4 323 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 RNF167Q9H6Y7 350 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 PATZ1Q9HBE1 687 aaKnown RBP6.36□□□□□ -1.39
VEGFA-214ENST00000493786 CLN8Q9UBY8 286 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 DAPK2Q9UIK4 370 aa6.36□□□□□ -1.39
VEGFA-214ENST00000493786 AKAP9Q99996 3911 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 TANC2Q9HCD6 1990 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 MAP1AP78559 2803 aaPredicted RBP6.35□□□□□ -1.39
VEGFA-214ENST00000493786 IGKV1D-17A0A075B6S4 117 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 SHISA3A0PJX4 238 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.35□□□□□ -1.39
VEGFA-214ENST00000493786 DEGS1O15121 323 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 SIGLEC5O15389 551 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 TMEM127O75204 238 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 OR7C1O76099 320 aaPredicted RBP6.35□□□□□ -1.39
VEGFA-214ENST00000493786 MPIG6BO95866 241 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 SFTPBP07988 381 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 MGMTP16455 207 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 GABRR1P24046 479 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 SOX6P35712 828 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 GZMKP49863 264 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 RBM11P57052 281 aaKnown RBP6.35□□□□□ -1.39
VEGFA-214ENST00000493786 NCS1P62166 190 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 SCN1BQ07699 218 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 IKZF1Q13422 519 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 IL13RA2Q14627 380 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 ZNF146Q15072 292 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 FAM189A2Q15884 450 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 IDNKQ5T6J7 187 aa6.35□□□□□ -1.39
VEGFA-214ENST00000493786 ATPAF1Q5TC12 328 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms