RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 EGR1P18146 543 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 CD80P33681 288 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 SOX6P35712 828 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 NR4A2P43354 598 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 NPBWR2P48146 333 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 DYNC1I2Q13409 638 aaKnown RBP9.69□□□□□ -0.86
LSM2-214ENST00000493387 NHLRC3Q5JS37 347 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 SPIN3Q5JUX0 258 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 HES5Q5TA89 166 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 ATPAF1Q5TC12 328 aaPredicted RBP9.69□□□□□ -0.86
LSM2-214ENST00000493387 LINC00596Q86U02 117 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 OSR2Q8N2R0 312 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 AP3S1Q92572 193 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 SLC25A28Q96A46 364 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 SLC25A46Q96AG3 418 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 ZNF488Q96MN9 340 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 RBM38Q9H0Z9 239 aaKnown RBP9.69□□□□□ -0.86
LSM2-214ENST00000493387 TMEM165Q9HC07 324 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 TANC2Q9HCD6 1990 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 RBFOX1Q9NWB1 397 aaKnown RBP9.69□□□□□ -0.86
LSM2-214ENST00000493387 ABRACLQ9P1F3 81 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 FBLN5Q9UBX5 448 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 DAPK2Q9UIK4 370 aa9.69□□□□□ -0.86
LSM2-214ENST00000493387 HRNRQ86YZ3 2850 aaPredicted RBP9.69□□□□□ -0.86
LSM2-214ENST00000493387 NKX6-3A6NJ46 265 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 OR2AT4A6NND4 320 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.68□□□□□ -0.86
LSM2-214ENST00000493387 SH2D1BO14796 132 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 WNT9BO14905 357 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 CRTAPO75718 401 aaPredicted RBP9.68□□□□□ -0.86
LSM2-214ENST00000493387 HEXAP06865 529 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 SERPINA2P20848 420 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 TGFBR1P36897 503 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 GMFBP60983 142 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 HNRNPA0Q13151 305 aaKnown RBP9.68□□□□□ -0.86
LSM2-214ENST00000493387 IL13RA2Q14627 380 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 ZNF146Q15072 292 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 ZMYND11Q15326 602 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 P2RY14Q15391 338 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 C2orf76Q3KRA6 126 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 ZNF404Q494X3 552 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 FAM201AQ5SY85 155 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 IDNKQ5T6J7 187 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 SFRP4Q6FHJ7 346 aaPredicted RBP9.68□□□□□ -0.86
LSM2-214ENST00000493387 DCDC5Q6ZRR9 648 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 SLC36A1Q7Z2H8 476 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 NR2C2APQ86WQ0 139 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 DEFB108BQ8NET1 73 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 OR51T1Q8NGJ9 327 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 NDNFQ8TB73 568 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 ACOT12Q8WYK0 555 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 PTX4Q96A99 478 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 MED30Q96HR3 178 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 C1orf147Q96MC9 270 aaPredicted RBP9.68□□□□□ -0.86
LSM2-214ENST00000493387 NKX3-1Q99801 234 aaPredicted RBP9.68□□□□□ -0.86
LSM2-214ENST00000493387 GAL3ST1Q99999 423 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 URM1Q9BTM9 101 aaKnown RBP9.68□□□□□ -0.86
LSM2-214ENST00000493387 BPESC1Q9GZL8 116 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 WDR13Q9H1Z4 485 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 LIN7BQ9HAP6 207 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 MIOXQ9UGB7 285 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 RAB22AQ9UL26 194 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 PCDHB10Q9UN67 800 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 ETV7Q9Y603 341 aa9.68□□□□□ -0.86
LSM2-214ENST00000493387 ANKRD17O75179 2603 aaKnown RBP9.67□□□□□ -0.86
LSM2-214ENST00000493387 FLNBO75369 2602 aaKnown RBP9.67□□□□□ -0.86
LSM2-214ENST00000493387 IGHV3OR15-7A0A075B7D8 119 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 IGHV4-30-2A0A087WSY4 118 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 SMIM30A4D0T7 59 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A10PA6NDY2 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A18PA6NE21 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A16PA6NEW6 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 A6NHS1 94 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A20PA6NIJ5 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A8PA6NJQ4 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A7PA6NKC0 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 RFPL4AA6NLU0 287 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A22PA8MWA6 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 TMEM14DPA8MWL7 114 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A12PA8MX19 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A5PA8MXJ8 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A23PA8MXZ1 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 RFPL4AL1F8VTS6 287 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 F8VVB4 439 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 F8VWA3 439 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 ZNF205O95201 554 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 CHRM2P08172 466 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A15PP0C7V4 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A13PP0C7W8 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A14PP0C7W9 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 FAM90A24PP0C7X0 464 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 VSIG8P0DPA2 414 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 PSG2P11465 335 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 MGMTP16455 207 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 ZNF182P17025 639 aaPredicted RBP9.67□□□□□ -0.86
LSM2-214ENST00000493387 RAB6AP20340 208 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 PRDX2P32119 198 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 CAV3P56539 151 aa9.67□□□□□ -0.86
LSM2-214ENST00000493387 QRFPP83859 136 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms