RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 OR11H6Q8NGC7 330 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 PPP1R35Q8TAP8 253 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 RORBQ92753 470 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 SNX22Q96L94 193 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 CIB1Q99828 191 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 GABARAPL3Q9BY60 117 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 CHST5Q9GZS9 411 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 NEK6Q9HC98 313 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 FAM53CQ9NYF3 392 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 ORC6Q9Y5N6 252 aa10.12□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF737O75373 536 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 CIB2O75838 187 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 CCL3L1P16619 93 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 PRKACBP22694 351 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 COX7A1P24310 79 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 PEX2P28328 305 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 CEBPDP49716 269 aaPredicted RBP10.11□□□□□ -0.79
COL6A1-205ENST00000492851 EFNB2P52799 333 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 EDDM3BP56851 147 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 OR12D2P58182 307 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 ACTC1P68032 377 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 ACTA1P68133 377 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 UBE2V2Q15819 145 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 CRIP3Q6Q6R5 217 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 AMIGO2Q86SJ2 522 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 C10orf67Q8IYJ2 551 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
COL6A1-205ENST00000492851 RPS4Y2Q8TD47 263 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 MRPL48Q96GC5 212 aaKnown RBP10.11□□□□□ -0.79
COL6A1-205ENST00000492851 AJUBAQ96IF1 538 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF714Q96N38 554 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 TBX5Q99593 518 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 IMPAD1Q9NX62 359 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 MTCH1Q9NZJ7 389 aa10.11□□□□□ -0.79
COL6A1-205ENST00000492851 FUOMA2VDF0 154 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 M0R129 80 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 ARG1P05089 322 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 ISG15P05161 165 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 OCM2P0CE71 109 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 OCMP0CE72 109 aaPredicted RBP10.1□□□□□ -0.79
COL6A1-205ENST00000492851 IGHV1-8P0DP01 117 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 DYNLT3P51808 116 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 EMX1Q04741 257 aaPredicted RBP10.1□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF273Q14593 569 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 ODF4Q2M2E3 257 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 SPIN3Q5JUX0 258 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 SLC25A30Q5SVS4 291 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 MINOS1Q5TGZ0 78 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 MEDAGQ5VYS4 303 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF626Q68DY1 528 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 SLC25A26Q70HW3 274 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 SSX6Q7RTT6 188 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 FAM110DQ8TAY7 271 aaPredicted RBP10.1□□□□□ -0.79
COL6A1-205ENST00000492851 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 C17orf50Q8WW18 174 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 CFHR4Q92496 578 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 EME1Q96AY2 570 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 SPSB1Q96BD6 273 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 RIBC2Q9H4K1 309 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 RHOFQ9HBH0 211 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 GNG8Q9UK08 70 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 OAZ3Q9UMX2 235 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 PCDHGB5Q9Y5G0 923 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 MINOS1-NBL1R4GNA1 71 aa10.1□□□□□ -0.79
COL6A1-205ENST00000492851 A0A0G2JK05 382 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 PEX14O75381 377 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 TSPAN15O95858 294 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 ALDOBP05062 364 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 PIPP12273 146 aaPredicted RBP10.09□□□□□ -0.79
COL6A1-205ENST00000492851 ERP29P30040 261 aaKnown RBP10.09□□□□□ -0.79
COL6A1-205ENST00000492851 POLR2IP36954 125 aaKnown RBP10.09□□□□□ -0.79
COL6A1-205ENST00000492851 CCR9P51686 369 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 BMXP51813 675 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 DLX6P56179 175 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 MTCP1P56278 107 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 IL18R1Q13478 541 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF146Q15072 292 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 FAM189A2Q15884 450 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 OR52W1Q6IF63 320 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 ZNF782Q6ZMW2 699 aaPredicted RBP10.09□□□□□ -0.79
COL6A1-205ENST00000492851 LHFPL2Q6ZUX7 228 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 UTS2BQ765I0 119 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 FAM58AQ8N1B3 248 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 PRSS35Q8N3Z0 413 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 EMG1Q92979 244 aaKnown RBP10.09□□□□□ -0.79
COL6A1-205ENST00000492851 SLAMF9Q96A28 289 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 PRSS22Q9GZN4 317 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 TCF19Q9Y242 345 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 LINC00312Q9Y6C7 94 aa10.09□□□□□ -0.79
COL6A1-205ENST00000492851 VWFP04275 2813 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 TRBV2A0A0J9YWF9 115 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 DAPL1A0PJW8 107 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 ODF3BA8MYP8 253 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 SH2D1BO14796 132 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 MGST3O14880 152 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 HAND1O96004 215 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 OPN1MWP04001 364 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 OPN1MW2P0DN77 364 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 OPN1MW3P0DN78 364 aa10.08□□□□□ -0.8
COL6A1-205ENST00000492851 ZNF20P17024 532 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms