RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 VGLL3A8MV65 326 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 CLDN34H7C241 214 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 MFNGO00587 321 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 ENSAO43768 121 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR2A4O95047 310 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 IGKV1-17P01599 117 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 IGHV1-46P01743 117 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 SNRPAP09012 282 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 RNASE2P10153 161 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 TEAD1P28347 426 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 KCNJ3P48549 501 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 TGM4P49221 684 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 GDI2P50395 445 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 ATP5G2Q06055 141 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 MEF2CQ06413 473 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 TMED1Q13445 227 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 GPR176Q14439 515 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZNF404Q494X3 552 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 CLLU1OSQ5K130 101 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 KCTD16Q68DU8 428 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 TBPL2Q6SJ96 375 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 FAM231DQ6ZW35 169 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 DAZ4Q86SG3 579 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 NT5DC3Q86UY8 548 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 LRRC8AQ8IWT6 810 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZNF555Q8NEP9 628 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 UBA3Q8TBC4 463 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 YIPF6Q96EC8 236 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 SMIM8Q96KF7 97 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZNF75AQ96N20 296 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 DERL3Q96Q80 235 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR2M4Q96R27 311 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR2A7Q96R45 310 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 VAT1Q99536 393 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 CIB1Q99828 191 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 C1orf50Q9BV19 199 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 RDH14Q9HBH5 336 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 DAZ1Q9NQZ3 744 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 NLE1Q9NVX2 485 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 STX18Q9P2W9 335 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 DHCR7Q9UBM7 475 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 CRCT1Q9UGL9 99 aa1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 NXT1Q9UKK6 140 aaKnown RBP1.44□□□□□ -2.18
HMGB1P30-201ENST00000492455 THADAQ6YHU6 1953 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 KIR2DS1A0A191URI9 304 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 A0A1B0GW15 77 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 IZUMO1RA6ND01 250 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 C9JQL5 133 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 hCG_2039718K7EN88 272 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 K7ERQ8 282 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 YKT6O15498 198 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 CST4P01036 141 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 RLN2P04090 185 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 SEC11BP0C7V7 166 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 HTR2BP41595 481 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 DSTNP60981 165 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 VSNL1P62760 191 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 RBX1P62877 108 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 STX4Q12846 297 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 Q499Y3 187 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 CLEC12AQ5QGZ9 265 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 UGT2A3Q6UWM9 527 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 FAM131AQ6UXB0 335 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 TRMT10CQ7L0Y3 403 aaKnown RBP1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 ITPRIPQ8IWB1 547 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 CYP4Z2PQ8N1L4 340 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 SPICQ8N5J4 248 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZDHHC22Q8N966 263 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 CDRT4Q8N9R6 151 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 ZFP62Q8NB50 900 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 DRAXINQ8NBI3 349 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR5H2Q8NGV7 314 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 TMEM239Q8WW34 195 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 CFAP53Q96M91 514 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 PEBP4Q96S96 227 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 NXF2Q9GZY0 626 aaKnown RBP1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 GOLPH3Q9H4A6 298 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 ABCB9Q9NP78 766 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 RBM22Q9NW64 420 aaKnown RBP eCLIP1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 DNAJC27Q9NZQ0 273 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 POFUT2Q9Y2G5 429 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 INSIG2Q9Y5U4 225 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 TMEM131Q92545 1883 aa1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 RPRD2Q5VT52 1461 aaKnown RBP1.43□□□□□ -2.18
HMGB1P30-201ENST00000492455 LOC389332A0A1B0GUA5 103 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 A0A1B0GXF2 115 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 UPK2O00526 184 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 PLPP3O14495 311 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 CDIPTO14735 213 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 FFAR1O14842 300 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 SLC37A4O43826 429 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 SHOX2O60902 331 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 CNMDO75829 334 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 CXorf1O96002 111 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 IGLV7-43P04211 117 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 OR5AC1P0C628 307 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 GIMD1P0DJR0 217 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 TAC1P20366 129 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 COL8A2P25067 703 aa1.42□□□□□ -2.18
HMGB1P30-201ENST00000492455 SLC6A1P30531 599 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms