RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	ZNF879	B4DU55	563 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	FCN3	O75636	299 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	FSHB	P01225	129 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4L2	P0CJ85	424 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4L3	P0CJ86	424 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4L4	P0CJ87	422 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4L5	P0CJ88	424 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4L6	P0CJ89	424 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4L7	P0CJ90	424 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	ADRA2C	P18825	462 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	CEL	P19835	753 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	PPP3R1	P63098	170 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	KISS1	Q15726	138 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DGUOK	Q16854	277 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451		Q499Y3	187 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	ZNF529	Q6P280	563 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	SPATA3	Q8NHX4	192 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	UPRT	Q96BW1	309 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	PGLYRP3	Q96LB9	341 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	CNTD2	Q9H8S5	307 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	SEBOX	Q9HB31	216 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	TAS2R4	Q9NYW5	299 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	CKLF	Q9UBR5	152 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	DUX4	Q9UBX2	424 aa		11.44	□□□□□ -0.58
PTPN7-215	ENST00000492451	MRPS14	O60783	128 aa	Known RBP	11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	ALDOB	P05062	364 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	CHRM2	P08172	466 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	TMEM225B	P0DP42	221 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	NDUFB7	P17568	137 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	EPHA1	P21709	976 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	FPR2	P25090	351 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	FGF12	P61328	243 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	IRF3	Q14653	427 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	MED22	Q15528	200 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	KRTAP24-1	Q3LI83	254 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	METTL11B	Q5VVY1	283 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	PRSS48	Q7RTY5	328 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	FAM58A	Q8N1B3	248 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	CD177	Q8N6Q3	437 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	ZNRF1	Q8ND25	227 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	LY6G5B	Q8NDX9	201 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	TMEM185A	Q8NFB2	350 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	H1FX	Q92522	213 aa	Known RBP	11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	EMG1	Q92979	244 aa	Known RBP	11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	RFT1	Q96AA3	541 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	SPACA5	Q96QH8	159 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	DCTN5	Q9BTE1	182 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	CCDC90B	Q9GZT6	254 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	FAM234A	Q9H0X4	552 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	TMEM138	Q9NPI0	162 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	OR14J1	Q9UGF5	321 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	GLS2	Q9UI32	602 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	NUP50	Q9UKX7	468 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	MAB21L2	Q9Y586	359 aa		11.43	□□□□□ -0.58
PTPN7-215	ENST00000492451	FBN3	Q75N90	2809 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	TRBV23-1	A0A0A0MS06	115 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451		A0A0A6YYJ9	748 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	PNMA8C	A0A1B0GUJ8	204 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451		F8VVB4	439 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451		F8VWA3	439 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	SPRY1	O43609	319 aa	Predicted RBP	11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	GPX5	O75715	221 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	TOX4	O94842	621 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	INMT	O95050	263 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	TFF1	P04155	84 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	SELL	P14151	372 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	EEF1B2	P24534	225 aa	Known RBP	11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	MAPK3	P27361	379 aa	Predicted RBP	11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	CAPZA1	P52907	286 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	RPS11	P62280	158 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	GPR50	Q13585	617 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	SPIN3	Q5JUX0	258 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	CMTM4	Q8IZR5	234 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	BATF2	Q8N1L9	274 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	FGFRL1	Q8N441	504 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	MS4A15	Q8N5U1	240 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	KIR3DL3	Q8N743	410 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	OR13C5	Q8NGS8	318 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	C8orf46	Q8TAG6	207 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	SGCD	Q92629	289 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	WDFY2	Q96P53	400 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	GPER1	Q99527	375 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	OCEL1	Q9H607	264 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	ISYNA1	Q9NPH2	558 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	LSM2	Q9Y333	95 aa	Known RBP	11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	KPTN	Q9Y664	436 aa		11.42	□□□□□ -0.58
PTPN7-215	ENST00000492451	TRBV5-7	A0A0A0MS05	114 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	TCF21	O43680	179 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	ANGPTL7	O43827	346 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	KDM4B	O94953	1096 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	PRKACA	P17612	351 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	IGFBP3	P17936	291 aa	Predicted RBP	11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	FST	P19883	344 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	BCL3	P20749	454 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	BDKRB2	P30411	391 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	NPBWR2	P48146	333 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	BMX	P51813	675 aa		11.41	□□□□□ -0.58
PTPN7-215	ENST00000492451	BPIFB3	P59826	476 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms