RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	TRAV18	A0A075B6X5	111 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	CTDSPL	O15194	276 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	AKR7A2	O43488	359 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	SCGN	O76038	276 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	CHRM2	P08172	466 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	DANCR	P0C864	163 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	EGR1	P18146	543 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	CPT2	P23786	658 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	RBMX	P38159	391 aa	Known RBP	12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	TMEM50B	P56557	158 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	IFITM3	Q01628	133 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	BAK1	Q16611	211 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	ZNF260	Q3ZCT1	412 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	PYDC2	Q56P42	97 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	NHLRC3	Q5JS37	347 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	RAB12	Q6IQ22	244 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	MOGAT3	Q86VF5	341 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	GDPD1	Q8N9F7	314 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	OR56B1	Q8NGI3	324 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	CCDC32	Q9BV29	185 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	HES4	Q9HCC6	221 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	DYNLRB1	Q9NP97	96 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	PCDHB16	Q9NRJ7	776 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	C1orf123	Q9NWV4	160 aa		12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	MRPS7	Q9Y2R9	242 aa	Known RBP	12.57	□□□□□ -0.4
COPS7B-222	ENST00000492423	UPK1B	O75841	260 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	CD8A	P01732	235 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	CSF3	P09919	207 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	PRKACA	P17612	351 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	TNFSF4	P23510	183 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	DGCR2	P98153	550 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	HOXA4	Q00056	320 aa	Predicted RBP	12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	DCTN2	Q13561	401 aa	Known RBP	12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	TESK1	Q15569	626 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM189A2	Q15884	450 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	TAF9	Q16594	264 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	PLAC9	Q5JTB6	97 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM209A	Q5JX71	171 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	DTX2	Q86UW9	622 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423		Q8IYB0	196 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM58A	Q8N1B3	248 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	OR10Z1	Q8NGY1	313 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	LRRC29	Q8WV35	223 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	EMG1	Q92979	244 aa	Known RBP	12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	TRIM63	Q969Q1	353 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	PHF21A	Q96BD5	680 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	AUNIP	Q9H7T9	357 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	RHOF	Q9HBH0	211 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	CBLN4	Q9NTU7	201 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	ST3GAL6	Q9Y274	331 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	PKDREJ	Q9NTG1	2253 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	DOPEY1	Q5JWR5	2465 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	ROS1	P08922	2347 aa		12.56	□□□□□ -0.4
COPS7B-222	ENST00000492423	DSCAM	O60469	2012 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	RELN	P78509	3460 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	hCG_1807616	A0A1W2PRN6	198 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	SRRM5	B3KS81	715 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	MFNG	O00587	321 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	GEMIN2	O14893	280 aa	Known RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	WNT9B	O14905	357 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	GSTZ1	O43708	216 aa	Predicted RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	SOD3	P08294	240 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	HIST1H1D	P16402	221 aa	Known RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	GABRR1	P24046	479 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	CHAT	P28329	748 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	CFHR2	P36980	270 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	PPOX	P50336	477 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	SNU13	P55769	128 aa	Known RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	SNRPD2	P62316	118 aa	Known RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	CCL8	P80075	99 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	PITPNA	Q00169	270 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	IL13RA2	Q14627	380 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	RNASE12	Q5GAN4	147 aa	Known RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	DNM1P46	Q6ZS02	220 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423		Q8TCH9	128 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	SMIM4	Q8WVI0	70 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	YIPF5	Q969M3	257 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	POM121	Q96HA1	1249 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	PECR	Q9BY49	303 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	MS4A5	Q9H3V2	200 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	FN3KRP	Q9HA64	309 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	GCM1	Q9NP62	436 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	PALMD	Q9NP74	551 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	ABCB10	Q9NRK6	738 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	ELF5	Q9UKW6	265 aa	Predicted RBP	12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	KCNK7	Q9Y2U2	307 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423	ABCA4	P78363	2273 aa		12.55	□□□□□ -0.4
COPS7B-222	ENST00000492423		A1L4Q6	167 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	MEIOC	A2RUB1	952 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM90A10P	A6NDY2	464 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM90A18P	A6NE21	464 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM90A16P	A6NEW6	464 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	TMEM235	A6NFC5	223 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM90A20P	A6NIJ5	464 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM90A8P	A6NJQ4	464 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM90A7P	A6NKC0	464 aa		12.54	□□□□□ -0.4
COPS7B-222	ENST00000492423	FAM90A22P	A8MWA6	464 aa		12.54	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms