RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GP1BAP07359 652 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 CALCRP30988 508 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 RBMXP38159 391 aaKnown RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 TAS2R46P59540 309 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 DEFA5Q01523 94 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF345Q14585 488 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 ABHD17BQ5VST6 288 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 FAHD2BQ6P2I3 314 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 SPERTQ8NA61 448 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 FAHD2AQ96GK7 314 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 TAAR9Q96RI9 348 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 ARPC5LQ9BPX5 153 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 FGF23Q9GZV9 251 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 TIMM10BQ9Y5J6 103 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 CADP27708 2225 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 LOC105371267A0A1B0GV96 52 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 A0A1W2PR80 420 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 TUBAL3A6NHL2 446 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 SLC33A1O00400 549 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 FCGR3AP08637 254 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 MMP7P09237 267 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 CD79AP11912 226 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 ICAM2P13598 275 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 HLA-GP17693 338 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 ATF4P18848 351 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF611Q8N823 705 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 OR5L1Q8NGL2 311 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 TTTY12Q9BZ98 90 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 STRADBQ9C0K7 418 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 ANXA10Q9UJ72 324 aa10.77□□□□□ -0.69
HMGN1-220ENST00000492280 LSM5Q9Y4Y9 91 aaKnown RBP10.77□□□□□ -0.69
HMGN1-220ENST00000492280 LILRA1O75019 489 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 F12P00748 615 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 ALDH3B1P43353 468 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 LHX2P50458 406 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 SRSF6Q13247 344 aaKnown RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 DAZAP2Q15038 168 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 IAH1Q2TAA2 248 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 ACTBL2Q562R1 376 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF585AQ6P3V2 769 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 TMPRSS7Q7RTY8 843 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 BPIFCQ8NFQ6 507 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 SLAMF9Q96A28 289 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 PIK3IP1Q96FE7 263 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF488Q96MN9 340 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 C14orf166Q9Y224 244 aaKnown RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 PIEZO2Q9H5I5 2752 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 XRCC2O43543 280 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 CYTIPO60759 359 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 CNR1P21554 472 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 CHATP28329 748 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 ID4P47928 161 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 GPM6AP51674 278 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 CLDN18P56856 261 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 PIGPP57054 158 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 PLGLB1Q02325 96 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 RBM39Q14498 530 aaKnown RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 CNN3Q15417 329 aaKnown RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 DCAF10Q5QP82 559 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 SPATA46Q5T0L3 261 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 H3F3CQ6NXT2 135 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 TMEM251Q8N6I4 163 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 CPNE4Q96A23 557 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 INTS12Q96CB8 462 aaKnown RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 ZNF442Q9H7R0 627 aa10.76□□□□□ -0.69
HMGN1-220ENST00000492280 BOKQ9UMX3 212 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-220ENST00000492280 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-220ENST00000492280 DIRAS3O95661 229 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 CD59P13987 128 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 PMP22Q01453 160 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 PLEKHN1Q494U1 663 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-220ENST00000492280 IGSF11Q5DX21 431 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 OR5T2Q8NGG2 359 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 NMES1Q9C002 83 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 DEFB127Q9H1M4 99 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 ZC4H2Q9NQZ6 224 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 CYTL1Q9NRR1 136 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 GHRLQ9UBU3 117 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 MED19A0JLT2 244 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-220ENST00000492280 IGHEP01854 428 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 APOC1P02654 83 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 OR5AC1P0C628 307 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 FCGR2CP31995 323 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 CBX5P45973 191 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 PAN3Q58A45 887 aaKnown RBP10.75□□□□□ -0.69
HMGN1-220ENST00000492280 NUFIP2Q7Z417 695 aaKnown RBP10.75□□□□□ -0.69
HMGN1-220ENST00000492280 OSR2Q8N2R0 312 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 POC1AQ8NBT0 407 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 SPSB1Q96BD6 273 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 BSCL2Q96G97 398 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-220ENST00000492280 SLC25A32Q9H2D1 315 aa10.75□□□□□ -0.69
HMGN1-220ENST00000492280 TNRC6AQ8NDV7 1962 aaKnown RBP10.74□□□□□ -0.69
HMGN1-220ENST00000492280 CEACAM18A8MTB9 384 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 FBXO24O75426 580 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 WISP2O76076 250 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 ACTL6AO96019 429 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 BCL3P20749 454 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 HAAOP46952 286 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 SPEM2Q0P670 501 aa10.74□□□□□ -0.69
HMGN1-220ENST00000492280 PDZK1IP1Q13113 114 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms