RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 HKR1P10072 659 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 CFPP27918 469 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 GBX2P52951 348 aaPredicted RBP20.23■□□□□ 0.83
UPF3A-209ENST00000492270 MTCP1P56278 107 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 COL10A1Q03692 680 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 AWAT1Q58HT5 328 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 XAF1Q6GPH4 301 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 METAP1DQ6UB28 335 aaPredicted RBP20.23■□□□□ 0.83
UPF3A-209ENST00000492270 PNKDQ8N490 385 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 OR4M1Q8NGD0 313 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 OPALINQ96PE5 141 aa20.23■□□□□ 0.83
UPF3A-209ENST00000492270 CASQ2O14958 399 aaPredicted RBP20.22■□□□□ 0.83
UPF3A-209ENST00000492270 TK1P04183 234 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 CALCBP10092 127 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 BCL3P20749 454 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 PRKACBP22694 351 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 NPBWR2P48146 333 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 OR2G6Q5TZ20 316 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 LHFPL2Q6ZUX7 228 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 EGFL6Q8IUX8 553 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 OR5AK2Q8NH90 309 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 EMG1Q92979 244 aaKnown RBP20.22■□□□□ 0.83
UPF3A-209ENST00000492270 NOX4Q9NPH5 578 aa20.22■□□□□ 0.83
UPF3A-209ENST00000492270 RBFOX1Q9NWB1 397 aaKnown RBP20.22■□□□□ 0.83
UPF3A-209ENST00000492270 TMEM212A6NML5 194 aa20.21■□□□□ 0.83
UPF3A-209ENST00000492270 GNAO1P09471 354 aa20.21■□□□□ 0.83
UPF3A-209ENST00000492270 RPL31P62899 125 aaKnown RBP20.21■□□□□ 0.83
UPF3A-209ENST00000492270 MRPL28Q13084 256 aaKnown RBP20.21■□□□□ 0.83
UPF3A-209ENST00000492270 CRIP3Q6Q6R5 217 aa20.21■□□□□ 0.83
UPF3A-209ENST00000492270 C1orf122Q6ZSJ8 110 aa20.21■□□□□ 0.83
UPF3A-209ENST00000492270 ASCC1Q8N9N2 400 aaKnown RBP20.21■□□□□ 0.83
UPF3A-209ENST00000492270 SETD9Q8NE22 299 aa20.21■□□□□ 0.83
UPF3A-209ENST00000492270 RGP1Q92546 391 aaPredicted RBP20.21■□□□□ 0.83
UPF3A-209ENST00000492270 SPSB1Q96BD6 273 aa20.21■□□□□ 0.83
UPF3A-209ENST00000492270 COMMD4Q9H0A8 199 aa20.21■□□□□ 0.83
UPF3A-209ENST00000492270 METTL8Q9H825 291 aaKnown RBP20.21■□□□□ 0.83
UPF3A-209ENST00000492270 TRBV2A0A0J9YWF9 115 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 ANGPTL7O43827 346 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 ZNF737O75373 536 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 CCDC159P0C7I6 412 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 DCKP27707 260 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 C16orf87Q6PH81 154 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 MKXQ8IYA7 352 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 OR5D18Q8NGL1 313 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 TSEN15Q8WW01 171 aaKnown RBP20.2■□□□□ 0.82
UPF3A-209ENST00000492270 CHIAQ9BZP6 476 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 ZCCHC4Q9H5U6 513 aa20.2■□□□□ 0.82
UPF3A-209ENST00000492270 IGKV1-12A0A0C4DH73 117 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 H0YAE9 185 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 K7N7A8 449 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 NPFFO15130 113 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 IGKV1D-12P01611 117 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 OCM2P0CE71 109 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 OCMP0CE72 109 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-209ENST00000492270 PIPP12273 146 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-209ENST00000492270 CCL3L1P16619 93 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 DUSP1P28562 367 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 CAPGP40121 348 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 SNU13P55769 128 aaKnown RBP20.19■□□□□ 0.82
UPF3A-209ENST00000492270 GUCA2AQ02747 115 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 PDZK1IP1Q13113 114 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 BLMHQ13867 455 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 ZNF273Q14593 569 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 TMEM200BQ69YZ2 307 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 HCP5Q6MZN7 132 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 C3orf56Q8N813 242 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 FAM234AQ9H0X4 552 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 UNKLQ9H9P5 680 aaKnown RBP20.19■□□□□ 0.82
UPF3A-209ENST00000492270 NKX1-2Q9UD57 310 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-209ENST00000492270 CLEC2DQ9UHP7 191 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 DIMT1Q9UNQ2 313 aaKnown RBP20.19■□□□□ 0.82
UPF3A-209ENST00000492270 DHDHQ9UQ10 334 aa20.19■□□□□ 0.82
UPF3A-209ENST00000492270 CAB39Q9Y376 341 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-209ENST00000492270 TMEM82A0PJX8 343 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 MEX3AA1L020 520 aaKnown RBP20.18■□□□□ 0.82
UPF3A-209ENST00000492270 LALBAP00709 142 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 IGHV4-59P01825 116 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 MT-ND2P03891 347 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 CHRM2P08172 466 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 ERVFRD-1P60508 538 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 IL18R1Q13478 541 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 LAIR2Q6ISS4 152 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 FIP1L1Q6UN15 594 aaKnown RBP20.18■□□□□ 0.82
UPF3A-209ENST00000492270 Q8IYB0 196 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 FAM58AQ8N1B3 248 aa20.18■□□□□ 0.82
UPF3A-209ENST00000492270 SIRT4Q9Y6E7 314 aaPredicted RBP20.18■□□□□ 0.82
UPF3A-209ENST00000492270 IRGMA1A4Y4 181 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 FAM181BA6NEQ2 426 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 HAND1O96004 215 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 CYB5AP00167 134 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 PRKACAP17612 351 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 EEF1B2P24534 225 aaKnown RBP20.17■□□□□ 0.82
UPF3A-209ENST00000492270 SAA4P35542 130 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 SOX2P48431 317 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 FOXL1Q12952 345 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 CDK5R1Q15078 307 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 NCR3LG1Q68D85 454 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 LDLRAD3Q86YD5 345 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 C11orf42Q8N5U0 333 aa20.17■□□□□ 0.82
UPF3A-209ENST00000492270 PARP16Q8N5Y8 322 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms