RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PPA2Q9H2U2 334 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 RAB18Q9NP72 206 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 IGKV1-9A0A0C4DH69 117 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 A6NIN4 97 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 FAM90A22PA8MWA6 464 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 SYT7O43581 403 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF728P0DKX0 622 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 KIR3DL2P43630 455 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 RASSF2P50749 326 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF146Q15072 292 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 C2orf68Q2NKX9 166 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF626Q68DY1 528 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 CCBE1Q6UXH8 406 aaPredicted RBP6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 UTS2BQ765I0 119 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 LHFPL4Q7Z7J7 247 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 OR8H2Q8N162 312 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 YIPF7Q8N8F6 280 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 OR4M1Q8NGD0 313 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 PP6455Q8WZ26 134 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 SNX22Q96L94 193 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 CEP19Q96LK0 163 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 MBOAT4Q96T53 435 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 SERTAD4Q9NUC0 356 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 SIGLEC9Q9Y336 463 aa6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 TBL2Q9Y4P3 447 aaKnown RBP6.77□□□□□ -1.33
SMARCB1-207ENST00000491967 TRBV2A0A0J9YWF9 115 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 A6NDX4 124 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 PSPNO60542 156 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 GATBO75879 557 aaKnown RBP6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 RPP14O95059 124 aaKnown RBP6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 ALX3O95076 343 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 MT-ND2P03891 347 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 OPN1MWP04001 364 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 ALPLP05186 524 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 OPN1MW2P0DN77 364 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 OPN1MW3P0DN78 364 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 IGHV1-8P0DP01 117 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 LMO1P25800 156 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 ERP29P30040 261 aaKnown RBP6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 CCR9P51686 369 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 BMXP51813 675 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 CAPZA1P52907 286 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 SNRPGP62308 76 aaKnown RBP6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 C1orf146Q5VVC0 180 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 SLC25A26Q70HW3 274 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 Q8IYB0 196 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 ENTHD1Q8IYW4 607 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 RDH10Q8IZV5 341 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 OR52N4Q8NGI2 321 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 OR2G2Q8NGZ5 317 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 RFKQ969G6 155 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 UBE2FQ969M7 185 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 ADAT3Q96EY9 351 aaPredicted RBP6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF649Q9BS31 505 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 NPFFR1Q9GZQ6 430 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 WNT10AQ9GZT5 417 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF702PQ9H963 129 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 FRRS1LQ9P0K9 344 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 GTF2A1LQ9UNN4 478 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 SLC7A11Q9UPY5 501 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 TCF19Q9Y242 345 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 EXOGQ9Y2C4 368 aaKnown RBP6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 LINC00312Q9Y6C7 94 aa6.76□□□□□ -1.33
SMARCB1-207ENST00000491967 A0A0G2JK05 382 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 FAM230AA0A1W2PPH8 454 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 OR4C45A6NMZ5 311 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 H3BNX3 289 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 SERPINA3P01011 423 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 UBCP0CG48 685 aaKnown RBP6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 GABRB1P18505 474 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 PAX6P26367 422 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 NPBWR2P48146 333 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 NANOS3P60323 173 aaKnown RBP6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 CDC42P60953 191 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 ZNF91Q05481 1191 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 PDZK1IP1Q13113 114 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 LY6EQ16553 131 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 SPIN3Q5JUX0 258 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 MINOS1Q5TGZ0 78 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 TMEM244Q5VVB8 128 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 OR10H4Q8NGA5 316 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 OR4C13Q8NGP0 309 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 OR13D1Q8NGV5 346 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 OR2T6Q8NHC8 308 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 TRMT10AQ8TBZ6 339 aaKnown RBP6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 CORO2AQ92828 525 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 SLAMF9Q96A28 289 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 FOXRED1Q96CU9 486 aaPredicted RBP6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 TBX5Q99593 518 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 RHOFQ9HBH0 211 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 OR14J1Q9UGF5 321 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 MINOS1-NBL1R4GNA1 71 aa6.75□□□□□ -1.33
SMARCB1-207ENST00000491967 IGKV1-12A0A0C4DH73 117 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 LOC107986453A0A1B0GWG9 222 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 hADV38S2A0JD32 116 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 ADARB2-AS1A8MUL3 147 aa6.74□□□□□ -1.33
SMARCB1-207ENST00000491967 MGST3O14880 152 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms