RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CADM1Q9BY67 442 aaKnown RBP7.12□□□□□ -1.27
NUP50-217ENST00000491860 ELL3Q9HB65 397 aaPredicted RBP7.12□□□□□ -1.27
NUP50-217ENST00000491860 DSCAML1Q8TD84 2053 aa7.12□□□□□ -1.27
NUP50-217ENST00000491860 FAM230AA0A1W2PPH8 454 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 A0A1W2PQL4 384 aaPredicted RBP7.11□□□□□ -1.27
NUP50-217ENST00000491860 FAM90A8PA6NJQ4 464 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 C17orf98A8MV24 154 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 PRR32B1ATL7 298 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 CIB2O75838 187 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OCM2P0CE71 109 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OCMP0CE72 109 aaPredicted RBP7.11□□□□□ -1.27
NUP50-217ENST00000491860 ZNF728P0DKX0 622 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 PRKACBP22694 351 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 AZGP1P25311 298 aaKnown RBP7.11□□□□□ -1.27
NUP50-217ENST00000491860 EDDM3BP56851 147 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OR12D2P58182 307 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 KRTAP10-3P60369 221 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 COL10A1Q03692 680 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 EMX1Q04741 257 aaPredicted RBP7.11□□□□□ -1.27
NUP50-217ENST00000491860 IL18R1Q13478 541 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 SPIN3Q5JUX0 258 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 MEDAGQ5VYS4 303 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OR52W1Q6IF63 320 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 LHFPL2Q6ZUX7 228 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OR8H2Q8N162 312 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 PNKDQ8N490 385 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OR10H4Q8NGA5 316 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OR11H6Q8NGC7 330 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 OR4M1Q8NGD0 313 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 HAVCR2Q8TDQ0 301 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 PPP1R14AQ96A00 147 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 SPSB1Q96BD6 273 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 CENPNQ96H22 339 aaPredicted RBP7.11□□□□□ -1.27
NUP50-217ENST00000491860 ZNF488Q96MN9 340 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 ZNF714Q96N38 554 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 CIB1Q99828 191 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 TTTY10Q9BZA0 68 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 IMPAD1Q9NX62 359 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.11□□□□□ -1.27
NUP50-217ENST00000491860 LINC00312Q9Y6C7 94 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 MINOS1-NBL1R4GNA1 71 aa7.11□□□□□ -1.27
NUP50-217ENST00000491860 TRBV2A0A0J9YWF9 115 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 ODF3BA8MYP8 253 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 MGST3O14880 152 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 XPNPEP2O43895 674 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 MITFO75030 526 aaPredicted RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 PEX14O75381 377 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 TFF1P04155 84 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 ARG1P05089 322 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 ISG15P05161 165 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 IGHV1-8P0DP01 117 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 ZNF20P17024 532 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 COX7A1P24310 79 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 ERP29P30040 261 aaKnown RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 MRPL28Q13084 256 aaKnown RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 LY6EQ16553 131 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 SLC25A30Q5SVS4 291 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 ZNF626Q68DY1 528 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 CRIP3Q6Q6R5 217 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 UTS2BQ765I0 119 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 C16orf82Q7Z2V1 217 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 BCDIN3DQ7Z5W3 292 aaKnown RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 RTN4RL2Q86UN3 420 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 ANGPTL5Q86XS5 388 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 C11orf42Q8N5U0 333 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 OR4S1Q8NGB4 309 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 TRMT10AQ8TBZ6 339 aaKnown RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 CFHR4Q92496 578 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 RORBQ92753 470 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 EMG1Q92979 244 aaKnown RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 CREB3L1Q96BA8 519 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 CPNE2Q96FN4 548 aaPredicted RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 AKR1E2Q96JD6 320 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 TBX5Q99593 518 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 PRSS22Q9GZN4 317 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 GAL3ST2Q9H3Q3 398 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 RIBC2Q9H4K1 309 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 TCF19Q9Y242 345 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 UBE2J1Q9Y385 318 aaPredicted RBP7.1□□□□□ -1.27
NUP50-217ENST00000491860 SESN1Q9Y6P5 492 aa7.1□□□□□ -1.27
NUP50-217ENST00000491860 LOC107986453A0A1B0GWG9 222 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 F2RL2O00254 374 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 SH2D1BO14796 132 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 ZNF737O75373 536 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 TSPAN15O95858 294 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 HAND1O96004 215 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 OPN1MWP04001 364 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 OPN1MW2P0DN77 364 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 OPN1MW3P0DN78 364 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 CCL3L1P16619 93 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 CCR9P51686 369 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 BMXP51813 675 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 DLX1P56177 255 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 DLX6P56179 175 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 MTCP1P56278 107 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 ISL1P61371 349 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 ACTA2P62736 377 aa7.09□□□□□ -1.27
NUP50-217ENST00000491860 ACTG2P63267 376 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms