RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 LOC107986453A0A1B0GWG9 222 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 METTL15A6NJ78 407 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 FAM90A8PA6NJQ4 464 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 ODF3BA8MYP8 253 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 INMTO95050 263 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 ARG1P05089 322 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 CHRM2P08172 466 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 ZNF728P0DKX0 622 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 VSIG10L2P0DP72 767 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 FCGR1AP12314 374 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 POLR2IP36954 125 aaKnown RBP11.04□□□□□ -0.64
COL6A3-211ENST00000491233 EDDM3AQ14507 147 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 C1orf146Q5VVC0 180 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 SLC25A26Q70HW3 274 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 GDPD3Q7L5L3 318 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 TCF23Q7RTU1 214 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 FAM220AQ7Z4H9 259 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 OR8H2Q8N162 312 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 PRSS35Q8N3Z0 413 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 FOXRED1Q96CU9 486 aaPredicted RBP11.04□□□□□ -0.64
COL6A3-211ENST00000491233 BORCS8Q96FH0 119 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 ADI1Q9BV57 179 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 GABARAPL3Q9BY60 117 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 TCF19Q9Y242 345 aa11.04□□□□□ -0.64
COL6A3-211ENST00000491233 TBL2Q9Y4P3 447 aaKnown RBP11.04□□□□□ -0.64
COL6A3-211ENST00000491233 PRKDCP78527 4128 aaKnown RBP11.03□□□□□ -0.64
COL6A3-211ENST00000491233 PLXNB1O43157 2135 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 TMEM82A0PJX8 343 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 VGLL3A8MV65 326 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 SULT1C4O75897 302 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 RBP4P02753 201 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 IGHV1-8P0DP01 117 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 ATP6V1E1P36543 226 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 KIR3DL2P43630 455 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 FUT6P51993 359 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 ZNF85Q03923 595 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 CNN3Q15417 329 aaKnown RBP11.03□□□□□ -0.64
COL6A3-211ENST00000491233 FAM189A2Q15884 450 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 TP53I3Q53FA7 332 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 LDLRAD2Q5SZI1 272 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 ZNF626Q68DY1 528 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 CCDC54Q8NEL0 328 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 OR8J1Q8NGP2 316 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 OR13D1Q8NGV5 346 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 CFHR4Q92496 578 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 EMG1Q92979 244 aaKnown RBP11.03□□□□□ -0.64
COL6A3-211ENST00000491233 EME1Q96AY2 570 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 ZNF714Q96N38 554 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 ZNF702PQ9H963 129 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 FAM53CQ9NYF3 392 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 IL36RNQ9UBH0 155 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 GNG8Q9UK08 70 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 OAZ3Q9UMX2 235 aa11.03□□□□□ -0.64
COL6A3-211ENST00000491233 A0A0G2JK05 382 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 SAC3D1A6NKF1 404 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 HAND1O96004 215 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 IGHA1P01876 353 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 UBCP0CG48 685 aaKnown RBP11.02□□□□□ -0.65
COL6A3-211ENST00000491233 POU3F4P49335 361 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 RAB13P51153 203 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 ISL1P61371 349 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 DYNC1I2Q13409 638 aaKnown RBP11.02□□□□□ -0.65
COL6A3-211ENST00000491233 TMED1Q13445 227 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 HABP2Q14520 560 aaPredicted RBP11.02□□□□□ -0.65
COL6A3-211ENST00000491233 SSX2Q16385 188 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 TMEM219Q86XT9 240 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 EGFL6Q8IUX8 553 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 TPRX1Q8N7U7 411 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 OR11H6Q8NGC7 330 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 RPS4Y2Q8TD47 263 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 SNX22Q96L94 193 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 ABCB10Q9NRK6 738 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 RBFOX1Q9NWB1 397 aaKnown RBP11.02□□□□□ -0.65
COL6A3-211ENST00000491233 TGP01266 2768 aa11.02□□□□□ -0.65
COL6A3-211ENST00000491233 A6NDX4 124 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 FBXO24O75426 580 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 SERPINA3P01011 423 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 RASSF2P50749 326 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 SNU13P55769 128 aaKnown RBP11.01□□□□□ -0.65
COL6A3-211ENST00000491233 ACTA2P62736 377 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 ACTG2P63267 376 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 ACTC1P68032 377 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 ACTA1P68133 377 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 ZNF91Q05481 1191 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 MEF2CQ06413 473 aaPredicted RBP11.01□□□□□ -0.65
COL6A3-211ENST00000491233 GRK1Q15835 563 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 CCBE1Q6UXH8 406 aaPredicted RBP11.01□□□□□ -0.65
COL6A3-211ENST00000491233 Q8IYB0 196 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 RDH10Q8IZV5 341 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 LYG1Q8N1E2 194 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 DTX3Q8N9I9 347 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 OR52N4Q8NGI2 321 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 PP6455Q8WZ26 134 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 RFKQ969G6 155 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 RNF166Q96A37 237 aaPredicted RBP11.01□□□□□ -0.65
COL6A3-211ENST00000491233 C10orf35Q96D05 121 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 ADAT3Q96EY9 351 aaPredicted RBP11.01□□□□□ -0.65
COL6A3-211ENST00000491233 CENPNQ96H22 339 aaPredicted RBP11.01□□□□□ -0.65
COL6A3-211ENST00000491233 OSBPL10Q9BXB5 764 aa11.01□□□□□ -0.65
COL6A3-211ENST00000491233 CHST6Q9GZX3 395 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms