RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 DGUOKQ16854 277 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 CR1LQ2VPA4 569 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 SMIM21Q3B7S5 101 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 KCTD21Q4G0X4 260 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 UBE2UQ5VVX9 321 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 TMEM91Q6ZNR0 172 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 C1orf229Q6ZS94 237 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 MS4A15Q8N5U1 240 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 TMEM138Q9NPI0 162 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 METRNQ9UJH8 293 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 MAB21L2Q9Y586 359 aa11.94□□□□□ -0.5
SRGAP3-208ENST00000490348 PPIAL4CA0A0B4J2A2 164 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 GABRPO00591 440 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 ALDOBP05062 364 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 SFTPBP07988 381 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 CALCBP10092 127 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 TGFBR2P37173 567 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 PPP3R1P63098 170 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 IKZF1Q13422 519 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 FAM120AOSQ5T036 256 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 IL17RELQ6ZVW7 336 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 TMPRSS13Q9BYE2 586 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 DNTTIP1Q9H147 329 aa11.93□□□□□ -0.5
SRGAP3-208ENST00000490348 SIGLEC5O15389 551 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 KDM4BO94953 1096 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 BDKRB2P30411 391 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 OR3A4PP47883 348 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 FABP5Q01469 135 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 ARMCX4Q5H9R4 360 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 DDI2Q5TDH0 399 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 FAHD2BQ6P2I3 314 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 SATL1Q86VE3 508 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 MKXQ8IYA7 352 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 SVOPQ8N4V2 548 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 ZNRF1Q8ND25 227 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 SDSLQ96GA7 329 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 FAHD2AQ96GK7 314 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 OPN4Q9UHM6 478 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 FOXJ3Q9UPW0 622 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 ATRQ13535 2644 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 A0A0G2JMP0 313 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 A0A0X1KG70 313 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 KNG1P01042 644 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 UCHL1P09936 223 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 ADRA2CP18825 462 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 GABRA5P31644 462 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 PRDX2P32119 198 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 GABRA2P47869 451 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 NPY4RP50391 375 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 SLC36A1Q7Z2H8 476 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 CEACAM19Q7Z692 300 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 SAXO1Q8IYX7 474 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 ZSCAN4Q8NAM6 433 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 OR4M2Q8NGB6 313 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 EMG1Q92979 244 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 NDUFB11Q9NX14 153 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 CKLFQ9UBR5 152 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 INSIG2Q9Y5U4 225 aa11.92□□□□□ -0.5
SRGAP3-208ENST00000490348 LOC105371242A0A075B767 164 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 IGHV2-70DA0A0C4DH43 119 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 NKX6-3A6NJ46 265 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 MAGEB3O15480 346 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 CRLF1O75462 422 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 MAS1P04201 325 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 TMEM225BP0DP42 221 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 HOXB4P17483 251 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 MAPK3P27361 379 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 DUSP1P28562 367 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 ZNF93P35789 620 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 PTGFRP43088 359 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 IL13RA1P78552 427 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 ASCL4Q6XD76 172 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 BTN2A1Q7KYR7 527 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 LRRTM1Q86UE6 522 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 Q8IYB0 196 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 FAM58AQ8N1B3 248 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 TNFAIP8L1Q8WVP5 186 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 RAB40AQ8WXH6 277 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 ST8SIA4Q92187 359 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 ELL3Q9HB65 397 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 NEK6Q9HC98 313 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 HMG20AQ9NP66 347 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
SRGAP3-208ENST00000490348 CDRT1O95170 752 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 CYB5AP00167 134 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 PRKACAP17612 351 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 PAX8Q06710 450 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 ZNF146Q15072 292 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 PXT1Q8NFP0 134 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 THRSPQ92748 146 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 MED30Q96HR3 178 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 GPER1Q99527 375 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 CNTD2Q9H8S5 307 aa11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 SLC25A10Q9UBX3 287 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-208ENST00000490348 KIR2DS1A0A191URI9 304 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms