RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TRBV4-1A0A0J9YWV2 114 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C7orf66A4D0T2 115 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 H3BN98 237 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 FGF16O43320 207 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PRKYO43930 277 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NSA2O95478 260 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 MELTFP08582 738 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 RPL35AP18077 110 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PRKACGP22612 351 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR2B8PP59922 312 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACTBP60709 375 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACTA2P62736 377 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACTG1P63261 375 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACTG2P63267 376 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACTC1P68032 377 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACTA1P68133 377 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 MXD1Q05195 221 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 TNFRSF9Q07011 255 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 HNRNPA0Q13151 305 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 TNXAQ16473 311 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 GOLGA7BQ2TAP0 167 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CST9Q5W186 159 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 KDM4DQ6B0I6 523 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 LAIR2Q6ISS4 152 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 UQCC3Q6UW78 93 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 GDPGP1Q6ZNW5 385 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NAXDQ8IW45 347 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 HS3ST5Q8IZT8 346 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PUSL1Q8N0Z8 303 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF283Q8N7M2 679 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR11H7Q8NGC8 314 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR10K1Q8NGX5 313 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR2L2Q8NH16 312 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ING5Q8WYH8 240 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF599Q96NL3 588 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 MGLLQ99685 303 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C19orf24Q9BVV8 132 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 TM2D1Q9BX74 207 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 SLITRK2Q9H156 845 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PRO1933Q9H354 126 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CACYBPQ9HB71 228 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 FGF20Q9NP95 211 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 MYOZ1Q9NP98 299 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 B4GALT7Q9UBV7 327 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 MMACHCQ9Y4U1 282 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 HELZP42694 1942 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PLXNA4Q9HCM2 1894 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 TRAPPC13A5PLN9 417 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 KLRC4-KLRK1H3BQV0 150 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 M0QZK8 103 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CCL21O00585 134 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PCDH7O60245 1069 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ICOSLGO75144 302 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CDRT1O95170 752 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 IGHV3-48P01763 117 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C1QAP02745 245 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 IGLL1P15814 213 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PGAM1P18669 254 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 BCKDHBP21953 392 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CCNOP22674 350 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 S100A11P31949 105 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PRPS1P60891 318 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 GNB1P62873 340 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C1DQ13901 141 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CLINT1Q14677 625 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 TSNQ15631 228 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NDUFAF6Q330K2 333 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 VWA2Q5GFL6 755 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 COQ5Q5HYK3 327 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ULK3Q6PHR2 472 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CNIH2Q6PI25 160 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 GSG1LQ6UXU4 331 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ZBTB8OSQ8IWT0 167 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C6orf223Q8N319 242 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR4A15Q8NGL6 344 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 SPPL2BQ8TCT7 592 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NEK7Q8TDX7 302 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 POP5Q969H6 163 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 L3HYPDHQ96EM0 354 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 WDR34Q96EX3 536 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 MCEEQ96PE7 176 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 RHNO1Q9BSD3 238 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 DEFB127Q9H1M4 99 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ABCG5Q9H222 651 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 METTL17Q9H7H0 456 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CTPS2Q9NRF8 586 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 TEX10Q9NXF1 929 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 VNN3Q9NY84 501 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 XCL2Q9UBD3 114 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 DHCR7Q9UBM7 475 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 GNG8Q9UK08 70 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 BTRCQ9Y297 605 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF638Q14966 1978 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 A0A087WW49 117 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 FXYD6-FXYD2A0A087WZ82 144 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 A0A096LPI6 279 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 TRDCB7Z8K6 153 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 FXYD1O00168 92 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 UPK1AO00322 258 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CDIPTO14735 213 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms