RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 PSCAO43653 123 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 IGKV1-16P04430 117 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 LGALS7P47929 136 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 TMEM241Q24JQ0 296 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 C3orf22Q8N5N4 141 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 GPX8Q8TED1 209 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 GLYATL2Q8WU03 294 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 TAC3Q9UHF0 121 aa1.65□□□□□ -2.15
CCDC39-206ENST00000489868 ZNF706Q9Y5V0 76 aaPredicted RBP1.65□□□□□ -2.15
CCDC39-206ENST00000489868 IGKV1D-37A0A075B6S9 117 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 IGHV3-21A0A0B4J1V1 117 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 CASQ2O14958 399 aaPredicted RBP1.64□□□□□ -2.15
CCDC39-206ENST00000489868 PMCHP20382 165 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 MLF1P58340 268 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 LCN2P80188 198 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 CLLU1OSQ5K130 101 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 MLIPQ5VWP3 458 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 MRPL21Q7Z2W9 205 aaKnown RBP1.64□□□□□ -2.15
CCDC39-206ENST00000489868 CYP4Z2PQ8N1L4 340 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 SMIM8Q96KF7 97 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 TMED9Q9BVK6 235 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 SRRQ9GZT4 340 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 CHRNA10Q9GZZ6 450 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 TFR2Q9UP52 801 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 RHBDD3Q9Y3P4 386 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 ICE1Q9Y2F5 2266 aa1.64□□□□□ -2.15
CCDC39-206ENST00000489868 SBNO1A3KN83 1393 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 H3BMM0 161 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 ZNF701M0R085 212 aaPredicted RBP1.63□□□□□ -2.15
CCDC39-206ENST00000489868 SLC31A1O15431 190 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 MAGEA1P43355 309 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 GBE1Q04446 702 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 RAB11BQ15907 218 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 CDNFQ49AH0 187 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 PROKR2Q8NFJ6 384 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 OR10D4PQ8NGN7 298 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 PIH1D2Q8WWB5 315 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 RAD51AP1Q96B01 352 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 UBE2WQ96B02 151 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 TMEM106BQ9NUM4 274 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 RBM22Q9NW64 420 aaKnown RBP eCLIP1.63□□□□□ -2.15
CCDC39-206ENST00000489868 DDIT4Q9NX09 232 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 U3KQK5 164 aa1.63□□□□□ -2.15
CCDC39-206ENST00000489868 AKR7A2O43488 359 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 FOXF1Q12946 379 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 SSX1Q16384 188 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 PLCXD3Q63HM9 321 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 OR2W3Q7Z3T1 314 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 BPIFB6Q8NFQ5 453 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 ZFAND1Q8TCF1 268 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 TFGQ92734 400 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-206ENST00000489868 APOBEC3DQ96AK3 386 aaPredicted RBP1.62□□□□□ -2.15
CCDC39-206ENST00000489868 GABARAPL1Q9H0R8 117 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 INSIG2Q9Y5U4 225 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 TENM1Q9UKZ4 2725 aa1.62□□□□□ -2.15
CCDC39-206ENST00000489868 F5H5P2 479 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 K7ERS5 55 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 RGS5O15539 181 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 ZNF22P17026 224 aaPredicted RBP1.61□□□□□ -2.15
CCDC39-206ENST00000489868 COILP38432 576 aaPredicted RBP1.61□□□□□ -2.15
CCDC39-206ENST00000489868 ST3GAL4Q11206 333 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 ZNF404Q494X3 552 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 ULK3Q6PHR2 472 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 SETD3Q86TU7 594 aaPredicted RBP1.61□□□□□ -2.15
CCDC39-206ENST00000489868 MSRB3Q8IXL7 192 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 ZNF567Q8N184 647 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 CCNYL1Q8N7R7 359 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 OR8A1Q8NGG7 326 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 CERS2Q96G23 380 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 METTL26Q96S19 204 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 CLSTN2Q9H4D0 955 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 ARMC7Q9H6L4 198 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 ZNF780BQ9Y6R6 833 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 MYO9BQ13459 2157 aa1.61□□□□□ -2.15
CCDC39-206ENST00000489868 MIA3Q5JRA6 1907 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 FAM240AA0A1B0GVK7 77 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 LEUTXA8MZ59 168 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 G3V3Q6 166 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 TRAPPC6AO75865 159 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 GZMAP12544 262 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 CTLA4P16410 223 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 CD9P21926 228 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 IMPA1P29218 277 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 CCL23P55773 120 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 FAM27D1Q5T7N8 215 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 THOC7Q6I9Y2 204 aaKnown RBP1.6□□□□□ -2.15
CCDC39-206ENST00000489868 ANGPTL8Q6UXH0 198 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 LINC00596Q86U02 117 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 UBA3Q8TBC4 463 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 TCP10LQ8TDR4 215 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 C2orf15Q8WU43 125 aaKnown RBP1.6□□□□□ -2.15
CCDC39-206ENST00000489868 ZNF707Q96C28 371 aaPredicted RBP1.6□□□□□ -2.15
CCDC39-206ENST00000489868 KIR3DX1Q9H7L2 352 aa1.6□□□□□ -2.15
CCDC39-206ENST00000489868 LOC389332A0A1B0GUA5 103 aa1.59□□□□□ -2.15
CCDC39-206ENST00000489868 RNF113AO15541 343 aaKnown RBP1.59□□□□□ -2.15
CCDC39-206ENST00000489868 P0DMU3 169 aa1.59□□□□□ -2.15
CCDC39-206ENST00000489868 FAM231AP0DMU4 169 aa1.59□□□□□ -2.15
CCDC39-206ENST00000489868 FAM231CP0DMU5 169 aa1.59□□□□□ -2.15
CCDC39-206ENST00000489868 CLDN8P56748 225 aa1.59□□□□□ -2.15
CCDC39-206ENST00000489868 NT5CQ8TCD5 201 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms