RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 CCDC71LQ8N9Z2 235 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 OR4F15Q8NGB8 312 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CCDC26Q8TAB7 109 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CASTOR1Q8WTX7 329 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 RXFP2Q8WXD0 754 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ZMYND19Q96E35 227 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PIK3IP1Q96FE7 263 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 GMPPAQ96IJ6 420 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 DOK1Q99704 481 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PDCD1LG2Q9BQ51 273 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CALN1Q9BXU9 219 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 UBXN6Q9BZV1 441 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TRIM15Q9C019 465 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 METTL9Q9H1A3 318 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SRMSQ9H3Y6 488 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 C11orf49Q9H6J7 331 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ABCB9Q9NP78 766 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 BABAM2Q9NXR7 383 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IL17CQ9P0M4 197 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 GUCA1BQ9UMX6 200 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ALG5Q9Y673 324 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 MUC3AQ02505 3323 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SCN10AQ9Y5Y9 1956 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 MYH15Q9Y2K3 1946 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IGKV6D-21A0A0A0MT36 114 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 A0A0J9YWU9 116 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TMEM150BA6NC51 233 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 GOLGA6L19H0YKK7 550 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CXCR6O00574 342 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 DYNC1I1O14576 645 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 HCRTR1O43613 425 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SNAP29O95721 258 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TYMSP04818 313 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 FABP1P07148 127 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 OCM2P0CE71 109 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 RAB5AP20339 215 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 M6PRP20645 277 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 FUT3P21217 361 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 LMO2P25791 158 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 HRH1P35367 487 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 GGT2P36268 569 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ARL2P36404 184 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SERPINB5P36952 375 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PMELP40967 661 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 NCBP2P52298 156 aaKnown RBP eCLIP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TAS2R39P59534 338 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PPP1CBP62140 327 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 RPS21P63220 83 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 AESQ08117 197 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TWF1Q12792 350 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SKP2Q13309 424 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 LY6DQ14210 128 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TAF1AQ15573 450 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF630Q2M218 657 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ACSM3Q53FZ2 586 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 C1orf100Q5SVJ3 147 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 THOC7Q6I9Y2 204 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 FAM45BPQ6NSW5 357 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 RWDD4Q6NW29 188 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CDC20BQ86Y33 519 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SPICQ8N5J4 248 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 METTL13Q8N6R0 699 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 OR8G5Q8NG78 346 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PIFOQ8TCI5 191 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 LRRC29Q8WV35 223 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 SMIM19Q96E16 107 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 PGLYRP3Q96LB9 341 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF597Q96LX8 424 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 VGLL1Q99990 258 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 KCTD14Q9BQ13 255 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TMEM208Q9BTX3 173 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TRIM45Q9H8W5 580 aaPredicted RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TMEM27Q9HBJ8 222 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 C6orf50Q9HD87 102 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 AMBNQ9NP70 447 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 RBFOX1Q9NWB1 397 aaKnown RBP2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 CD274Q9NZQ7 290 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 TBX21Q9UL17 535 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 VSIG4Q9Y279 399 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 Q9Y3F1 56 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 C5orf42Q9H799 3197 aa2.39□□□□□ -2.03
DEPDC1-204ENST00000489862 IGHV2OR16-5A0A0B4J2B6 119 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 A8MX80 341 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 E9PAM4 449 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 SLCO1B7G3V0H7 640 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 H7C0C1 242 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 H7C423 109 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 KCNK1O00180 336 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 AZIN1O14977 448 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 NPIPB7O75200 414 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 CA11O75493 328 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 HPRT1P00492 218 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 SNRPCP09234 159 aaKnown RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF286BP0CG31 522 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 ZNF17P17021 662 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 ATF6P18850 670 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 PAX6P26367 422 aa2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 FGF8P55075 233 aaPredicted RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 MAGOHP61326 146 aaKnown RBP2.38□□□□□ -2.03
DEPDC1-204ENST00000489862 SELENOTP62341 195 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms