RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PLXND1Q9Y4D7 1925 aa4.19□□□□□ -1.74
SNRNP40-206ENST00000489853 CHD3Q12873 2000 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 POLR2AP24928 1970 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 SPTBN5Q9NRC6 3674 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 LOC102723971A0A1B0GUV8 181 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ANKUB1A6NFN9 424 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 PRRT4C9JH25 899 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 K7ERU9 68 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 NDUFS4O43181 175 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CTSVO60911 334 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 MTX2O75431 263 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 SEMA4FO95754 770 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 HOXB2P14652 356 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ALOX5APP20292 161 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 HSD11B1P28845 292 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 GRPRP30550 384 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CAPZBP47756 277 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 BLKP51451 505 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CNN1P51911 297 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 FGF8P55075 233 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 UCP3P55916 312 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF92Q03936 586 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 MRPL49Q13405 166 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 SLC22A6Q4U2R8 563 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TRMT12Q53H54 448 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TPTE2P1Q5T6R2 138 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 FAM90A2PQ658T7 463 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CNKSR3Q6P9H4 555 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TOMM20LQ6UXN7 152 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TMEM184AQ6ZMB5 413 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 SLC24A5Q71RS6 500 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 LHFPL1Q86WI0 220 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 APOBEC3FQ8IUX4 373 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CMTM1Q8IZ96 169 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF619Q8N2I2 560 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 DCAF4L2Q8NA75 395 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 OR14C36Q8NHC7 312 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TOMM40LQ969M1 308 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 RPUSD4Q96CM3 377 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ALG14Q96F25 216 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CNRIP1Q96F85 164 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 SDSLQ96GA7 329 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 HHIPL1Q96JK4 782 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 BTF3L4Q96K17 158 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 MRGPRX1Q96LB2 322 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 OR5B12Q96R08 314 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 P2RX4Q99571 388 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 GABRG3Q99928 467 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TPSD1Q9BZJ3 242 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ULBP3Q9BZM4 244 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ZBP1Q9H171 429 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 OR10A5Q9H207 317 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CST9LQ9H4G1 147 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 WDR76Q9H967 626 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TMEM9BQ9NQ34 198 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 CISD1Q9NZ45 108 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 OR6C3Q9NZP0 311 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF319Q9P2F9 582 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 UQCR10Q9UDW1 63 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 HSF4Q9ULV5 492 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 DHDHQ9UQ10 334 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 LAMP3Q9UQV4 416 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 LAMTOR2Q9Y2Q5 125 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 KLHDC2Q9Y2U9 406 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 WIPI2Q9Y4P8 454 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 RBM7Q9Y580 266 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 SCN5AQ14524 2016 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 DENND4CQ5VZ89 1909 aa4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 NUP210Q8TEM1 1887 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-206ENST00000489853 TRIP12Q14669 1992 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 A0A0B4J2E0 115 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 A0A1B0GX12 115 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 RNF212BA8MTL3 300 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 GPR89AB7ZAQ6 455 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 H3BS24 57 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 KLKB1P03952 638 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 POU2F2P09086 479 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 GPR89BP0CG08 455 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 GZMHP20718 246 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 GLRA1P23415 457 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 PSMB5P28074 263 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 EPHA8P29322 1005 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 CORO1AP31146 461 aaKnown RBP4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 MPLP40238 635 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 SSR2P43308 183 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 CDC34P49427 236 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 PRLHRP49683 370 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 CLDN18P56856 261 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 TPPP2P59282 170 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 DCAF7P61962 342 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 RAB11AP62491 216 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 GNB2P62879 340 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 RHOGP84095 191 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 NHLH1Q02575 133 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 MFGE8Q08431 387 aaPredicted RBP4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF266Q14584 549 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 NFATC4Q14934 902 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 NUMA1Q14980 2115 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 NSDHLQ15738 373 aa4.17□□□□□ -1.74
SNRNP40-206ENST00000489853 CEBPEQ15744 281 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms