RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 METRNQ9UJH8 293 aa8.86□□□□□ -0.99
SCAMP4-208ENST00000489554 PCDHB10Q9UN67 800 aa8.86□□□□□ -0.99
SCAMP4-208ENST00000489554 NOP16Q9Y3C1 178 aaKnown RBP8.86□□□□□ -0.99
SCAMP4-208ENST00000489554 SVEP1Q4LDE5 3571 aa8.86□□□□□ -0.99
SCAMP4-208ENST00000489554 CUBNO60494 3623 aa8.86□□□□□ -0.99
SCAMP4-208ENST00000489554 FBN1P35555 2871 aaKnown RBP8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 PQLC2LA1A4F0 135 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 SMIM30A4D0T7 59 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 TMEM178BH3BS89 294 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 TCF21O43680 179 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 FOXH1O75593 365 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 TPPPO94811 219 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 NRASP01111 189 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 CFPP27918 469 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 GNALP38405 381 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 MDH2P40926 338 aaKnown RBP8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 CAPZA1P52907 286 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 CAV3P56539 151 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 SCAND1P57086 179 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 BTG1P62324 171 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 PITPNAQ00169 270 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 DCAF12L2Q5VW00 463 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 MUC20Q8N307 709 aaPredicted RBP8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 CELF2-AS1Q8N7Q2 184 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 OR10AD1Q8NGE0 317 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 OR52N4Q8NGI2 321 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 OR5D14Q8NGL3 314 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 OR5P3Q8WZ94 311 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 PIGCQ92535 297 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 PAPOLGQ9BWT3 736 aaKnown RBP8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 SLC22A4Q9H015 551 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 METTL17Q9H7H0 456 aaPredicted RBP8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 TCF7L1Q9HCS4 588 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 GCM1Q9NP62 436 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 ABCB9Q9NP78 766 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 ABCB10Q9NRK6 738 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 DCAF16Q9NXF7 216 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 COMMD3Q9UBI1 195 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 MPC1Q9Y5U8 109 aa8.85□□□□□ -0.99
SCAMP4-208ENST00000489554 MXRA5Q9NR99 2828 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 PPIAL4EA0A075B759 164 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 A0A0A6YYJ9 748 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 PPIAL4CA0A0B4J2A2 164 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 LRRC30A6NM36 301 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 FAM25AB3EWG3 89 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 FAM25CB3EWG5 89 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 FAM25GB3EWG6 89 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 PPIAL4DF5H284 164 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 FSTL3O95633 263 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 PTBP3O95758 552 aaKnown RBP8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 MAS1P04201 325 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 ALDOBP05062 364 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 PPIAL4FP0DN26 164 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 RAB3AP20336 220 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 CPT2P23786 658 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 AZGP1P25311 298 aaKnown RBP8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 GATA4P43694 442 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 INPP1P49441 399 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 ZP1P60852 638 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 MAB21L1Q13394 359 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 ZMYND11Q15326 602 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 CEACAM21Q3KPI0 293 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 KRTAP24-1Q3LI83 254 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 IDNKQ5T6J7 187 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 PLCXD3Q63HM9 321 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 SFXN4Q6P4A7 337 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 MOB3CQ70IA8 216 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 LYSMD2Q8IV50 215 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 ZDHHC23Q8IYP9 409 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 C1orf87Q8N0U7 546 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 OR8H2Q8N162 312 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 POC5Q8NA72 575 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 NPRL2Q8WTW4 380 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 ERGIC1Q969X5 290 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 SLC25A28Q96A46 364 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 C1orf147Q96MC9 270 aaPredicted RBP8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 SPACA5Q96QH8 159 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 ADAT1Q9BUB4 502 aaKnown RBP8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 TMPRSS13Q9BYE2 586 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 PATZ1Q9HBE1 687 aaKnown RBP8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 TMEM138Q9NPI0 162 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 CKLFQ9UBR5 152 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 AK6Q9Y3D8 172 aaKnown RBP8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 TANC2Q9HCD6 1990 aa8.84□□□□□ -0.99
SCAMP4-208ENST00000489554 MEGF11A6BM72 1044 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 ANKRD30BLA7E2S9 258 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 F5H5P2 479 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 BDKRB2P30411 391 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 RBMXP38159 391 aaKnown RBP8.83□□□□□ -1
SCAMP4-208ENST00000489554 CD200P41217 278 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 LCN2P80188 198 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 PYDC2Q56P42 97 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 FAM76BQ5HYJ3 339 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 C1orf100Q5SVJ3 147 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 MZT2BQ6NZ67 158 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 C1QL2Q7Z5L3 287 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 C11orf53Q8IXP5 236 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 C19orf18Q8NEA5 215 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 OR5A2Q8NGI9 324 aa8.83□□□□□ -1
SCAMP4-208ENST00000489554 TRMT10AQ8TBZ6 339 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms