RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 OPALINQ96PE5 141 aa19.75■□□□□ 0.75
PTPN18-213ENST00000489215 RHOFQ9HBH0 211 aa19.75■□□□□ 0.75
PTPN18-213ENST00000489215 MTCH1Q9NZJ7 389 aa19.75■□□□□ 0.75
PTPN18-213ENST00000489215 OR14J1Q9UGF5 321 aa19.75■□□□□ 0.75
PTPN18-213ENST00000489215 GLS2Q9UI32 602 aa19.75■□□□□ 0.75
PTPN18-213ENST00000489215 EXOSC1Q9Y3B2 195 aaKnown RBP19.75■□□□□ 0.75
PTPN18-213ENST00000489215 IGKV1-27A0A075B6S5 117 aa19.74■□□□□ 0.75
PTPN18-213ENST00000489215 LIMS3P0CW19 117 aa19.74■□□□□ 0.75
PTPN18-213ENST00000489215 LIMS4P0CW20 117 aa19.74■□□□□ 0.75
PTPN18-213ENST00000489215 HKR1P10072 659 aa19.74■□□□□ 0.75
PTPN18-213ENST00000489215 SMN1Q16637 294 aaKnown RBP19.74■□□□□ 0.75
PTPN18-213ENST00000489215 RPL22L1Q6P5R6 122 aaKnown RBP19.74■□□□□ 0.75
PTPN18-213ENST00000489215 CNIH3Q8TBE1 160 aa19.74■□□□□ 0.75
PTPN18-213ENST00000489215 CPNE2Q96FN4 548 aaPredicted RBP19.74■□□□□ 0.75
PTPN18-213ENST00000489215 ZCCHC4Q9H5U6 513 aa19.74■□□□□ 0.75
PTPN18-213ENST00000489215 DIMT1Q9UNQ2 313 aaKnown RBP19.74■□□□□ 0.75
PTPN18-213ENST00000489215 POMT1Q9Y6A1 747 aa19.74■□□□□ 0.75
PTPN18-213ENST00000489215 IGKV1-9A0A0C4DH69 117 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 ZFPL1O95159 310 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 TFF1P04155 84 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 TK1P04183 234 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 CAPGP40121 348 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 RPL31P62899 125 aaKnown RBP19.73■□□□□ 0.75
PTPN18-213ENST00000489215 RUSC1-AS1Q66K80 236 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 C16orf87Q6PH81 154 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 C8orf59Q8N0T1 100 aaPredicted RBP19.73■□□□□ 0.75
PTPN18-213ENST00000489215 PARP16Q8N5Y8 322 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 SLAMF9Q96A28 289 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 DHDHQ9UQ10 334 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 FAM96BQ9Y3D0 163 aa19.73■□□□□ 0.75
PTPN18-213ENST00000489215 K7N7A8 449 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 HAX1O00165 279 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 CLIC3O95833 236 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 GABPB1Q06547 395 aaPredicted RBP19.72■□□□□ 0.75
PTPN18-213ENST00000489215 FAM185AQ8N0U4 392 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 Q8N7P7 452 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 OR51A4Q8NGJ6 313 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 SSMEM1Q8WWF3 244 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 EMG1Q92979 244 aaKnown RBP19.72■□□□□ 0.75
PTPN18-213ENST00000489215 TMEM80Q96HE8 168 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 C1orf147Q96MC9 270 aaPredicted RBP19.72■□□□□ 0.75
PTPN18-213ENST00000489215 SIRT7Q9NRC8 400 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 PCDHGB5Q9Y5G0 923 aa19.72■□□□□ 0.75
PTPN18-213ENST00000489215 HOXA3O43365 443 aaPredicted RBP19.71■□□□□ 0.75
PTPN18-213ENST00000489215 CD2P06729 351 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 UBE2E1P51965 193 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 ACSM1Q08AH1 577 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 PDZK1IP1Q13113 114 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 SPIN3Q5JUX0 258 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 SAXO1Q8IYX7 474 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 C3orf56Q8N813 242 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 OR10AC1Q8NH08 325 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 TSEN15Q8WW01 171 aaKnown RBP19.71■□□□□ 0.75
PTPN18-213ENST00000489215 DUX5Q96PT3 197 aa19.71■□□□□ 0.75
PTPN18-213ENST00000489215 SF3B6Q9Y3B4 125 aaKnown RBP19.71■□□□□ 0.75
PTPN18-213ENST00000489215 E9PI62 339 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 MAGEB3O15480 346 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 POU3F4P49335 361 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 ETV1P50549 477 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 COL10A1Q03692 680 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 FAM58AQ8N1B3 248 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 ASCC1Q8N9N2 400 aaKnown RBP19.7■□□□□ 0.74
PTPN18-213ENST00000489215 ZSCAN4Q8NAM6 433 aaPredicted RBP19.7■□□□□ 0.74
PTPN18-213ENST00000489215 OR13C9Q8NGT0 318 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 PPP1R35Q8TAP8 253 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 GPR148Q8TDV2 347 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 SNX22Q96L94 193 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 PDCD1LG2Q9BQ51 273 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 DPAGT1Q9H3H5 408 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 HEXA-AS1Q9H8Q6 139 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 ELL3Q9HB65 397 aaPredicted RBP19.7■□□□□ 0.74
PTPN18-213ENST00000489215 BABAM2Q9NXR7 383 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 CNOT2Q9NZN8 540 aaKnown RBP19.7■□□□□ 0.74
PTPN18-213ENST00000489215 SOX21Q9Y651 276 aaPredicted RBP19.7■□□□□ 0.74
PTPN18-213ENST00000489215 DNHD1Q96M86 4753 aa19.7■□□□□ 0.74
PTPN18-213ENST00000489215 EFCAB10A6NFE3 127 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 SULT1B1O43704 296 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 CRYBA1P05813 215 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 FBP1P09467 338 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 PIPP12273 146 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-213ENST00000489215 RPL15P61313 204 aaKnown RBP19.69■□□□□ 0.74
PTPN18-213ENST00000489215 GDPD3Q7L5L3 318 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 BATF2Q8N1L9 274 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 OR52N1Q8NH53 320 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 TNFRSF14Q92956 283 aa19.69■□□□□ 0.74
PTPN18-213ENST00000489215 MDFIC2A0A1B0GVS7 189 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 ANKRD65E5RJM6 399 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 RNASEK-C17orf49H0YIS7 233 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 NPFFO15130 113 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 MELTFP08582 738 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 HCKP08631 526 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 CEBPDP49716 269 aaPredicted RBP19.68■□□□□ 0.74
PTPN18-213ENST00000489215 SLC34A1Q06495 639 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 ZNF146Q15072 292 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 CDK5R1Q15078 307 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 TMEM200BQ69YZ2 307 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 LDLRAD3Q86YD5 345 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 PDZD9Q8IXQ8 264 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 OR8H2Q8N162 312 aa19.68■□□□□ 0.74
PTPN18-213ENST00000489215 C19orf12Q9NSK7 152 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms