RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 H0YAE9 185 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 WBP4O75554 376 aaKnown RBP20.42■□□□□ 0.86
HMGN1-217ENST00000489072 AZGP1P25311 298 aaKnown RBP20.42■□□□□ 0.86
HMGN1-217ENST00000489072 SAA4P35542 130 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 RBP2P50120 134 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 ATP1B3P54709 279 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 SMN1Q16637 294 aaKnown RBP20.42■□□□□ 0.86
HMGN1-217ENST00000489072 C11orf42Q8N5U0 333 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 MRPL48Q96GC5 212 aaKnown RBP20.42■□□□□ 0.86
HMGN1-217ENST00000489072 RDH12Q96NR8 316 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 FAM234AQ9H0X4 552 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 INPP5EQ9NRR6 644 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 C1RLQ9NZP8 487 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 ZNRD1Q9P1U0 126 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 IL36RNQ9UBH0 155 aa20.42■□□□□ 0.86
HMGN1-217ENST00000489072 RPL36Q9Y3U8 105 aaKnown RBP20.42■□□□□ 0.86
HMGN1-217ENST00000489072 K7N7A8 449 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 ZNF737O75373 536 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 FBP1P09467 338 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 ZNF273Q14593 569 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 RNF144BQ7Z419 303 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 EGFL6Q8IUX8 553 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 MKXQ8IYA7 352 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 ZNF676Q8N7Q3 588 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 ASCC1Q8N9N2 400 aaKnown RBP20.41■□□□□ 0.86
HMGN1-217ENST00000489072 OR5D13Q8NGL4 314 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 OR13C3Q8NGS6 347 aa20.41■□□□□ 0.86
HMGN1-217ENST00000489072 CAB39Q9Y376 341 aaPredicted RBP20.41■□□□□ 0.86
HMGN1-217ENST00000489072 MEIOCA2RUB1 952 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 GPR137BO60478 399 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 CCL3L1P16619 93 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 PRKACBP22694 351 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 NPBWR2P48146 333 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 POU3F4P49335 361 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 MTCP1P56278 107 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 ERVFRD-1P60508 538 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 TAF9Q16594 264 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 SHISA2Q6UWI4 295 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 ZNF555Q8NEP9 628 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 EMG1Q92979 244 aaKnown RBP20.4■□□□□ 0.86
HMGN1-217ENST00000489072 RBFOX1Q9NWB1 397 aaKnown RBP20.4■□□□□ 0.86
HMGN1-217ENST00000489072 MMP24Q9Y5R2 645 aa20.4■□□□□ 0.86
HMGN1-217ENST00000489072 POM121CA8CG34 1229 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 SPRY1O43609 319 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-217ENST00000489072 CLIC3O95833 236 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 CRYBA1P05813 215 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 CHRM2P08172 466 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 LIMS3P0CW19 117 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 LIMS4P0CW20 117 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 PIPP12273 146 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-217ENST00000489072 BCL3P20749 454 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 RAG2P55895 527 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 ACSM1Q08AH1 577 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 LRRC36Q1X8D7 754 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 LPCAT4Q643R3 524 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 LHFPL2Q6ZUX7 228 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 OR13C9Q8NGT0 318 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 C17orf50Q8WW18 174 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 DYRK2Q92630 601 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 RFT1Q96AA3 541 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 SPSB1Q96BD6 273 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 OPALINQ96PE5 141 aa20.39■□□□□ 0.85
HMGN1-217ENST00000489072 MYCBPQ99417 103 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-217ENST00000489072 TMEM82A0PJX8 343 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 ANGPTL7O43827 346 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 ZFPL1O95159 310 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 NDUFA7O95182 113 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 KLHL22Q53GT1 634 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 CRIP3Q6Q6R5 217 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 SGMS2Q8NHU3 365 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 CNIH3Q8TBE1 160 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 AJUBAQ96IF1 538 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 SPACA5Q96QH8 159 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 PDCD1LG2Q9BQ51 273 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 DPAGT1Q9H3H5 408 aa20.38■□□□□ 0.85
HMGN1-217ENST00000489072 FGF20Q9NP95 211 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-217ENST00000489072 SF3B6Q9Y3B4 125 aaKnown RBP20.38■□□□□ 0.85
HMGN1-217ENST00000489072 TRBV2A0A0J9YWF9 115 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 MT-ND2P03891 347 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 CALCBP10092 127 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 DLX6P56179 175 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 PDZK1IP1Q13113 114 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 ZNF691Q5VV52 312 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 C17orf107Q6ZR85 190 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 Q8IYB0 196 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 FAM58AQ8N1B3 248 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 JAM3Q9BX67 310 aa20.37■□□□□ 0.85
HMGN1-217ENST00000489072 SEBOXQ9HB31 216 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-217ENST00000489072 IGKV1-12A0A0C4DH73 117 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 A0A1W2PPH5 198 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 MEX3AA1L020 520 aaKnown RBP20.36■□□□□ 0.85
HMGN1-217ENST00000489072 TMEM212A6NML5 194 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 HAND1O96004 215 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 PAHP00439 452 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 IGKV1D-12P01611 117 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 PEX2P28328 305 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 DUSP1P28562 367 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 GTF2A1P52655 376 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-217ENST00000489072 GBX2P52951 348 aaPredicted RBP20.36■□□□□ 0.85
HMGN1-217ENST00000489072 RPL15P61313 204 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms