RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 DSN1Q9H410 356 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 ASB7Q9H672 318 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 C12orf4Q9NQ89 552 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 INIPQ9NRY2 104 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 ZNF230Q9UIE0 474 aaPredicted RBP1.54□□□□□ -2.16
CD46-215ENST00000488596 ANXA10Q9UJ72 324 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 CHTOPQ9Y3Y2 248 aaKnown RBP1.54□□□□□ -2.16
CD46-215ENST00000488596 INSIG2Q9Y5U4 225 aa1.54□□□□□ -2.16
CD46-215ENST00000488596 IGKV1OR2-108A0A075B7D4 117 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 A0A0J9YYE9 177 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 LOC389332A0A1B0GUA5 103 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 UPK1AO00322 258 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 SEC16AO15027 2179 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 NACADO15069 1562 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 CBR3O75828 277 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 OR2A4O95047 310 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 SVILO95425 2214 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 TRBC1P01850 177 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 RLN2P04090 185 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 SLC6A1P30531 599 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 DEKP35659 375 aaKnown RBP1.53□□□□□ -2.16
CD46-215ENST00000488596 ARR3P36575 388 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 KLF3P57682 345 aaPredicted RBP1.53□□□□□ -2.16
CD46-215ENST00000488596 TRDNQ13061 729 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 IHHQ14623 411 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 STK38Q15208 465 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 SLC9A3R2Q15599 337 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 SSX1Q16384 188 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 LINC00303Q3SY05 128 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 MIA3Q5JRA6 1907 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 SYT6Q5T7P8 510 aaPredicted RBP1.53□□□□□ -2.16
CD46-215ENST00000488596 ZNF660Q6AZW8 331 aaPredicted RBP1.53□□□□□ -2.16
CD46-215ENST00000488596 SSH2Q76I76 1423 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 TMEM144Q7Z5S9 345 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 LINC00596Q86U02 117 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 ZNF555Q8NEP9 628 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 OR2K2Q8NGT1 345 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 OR5H2Q8NGV7 314 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 MITD1Q8WV92 249 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 ADTRPQ96IZ2 230 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 OR2M4Q96R27 311 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 OR2A7Q96R45 310 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 THTPAQ9BU02 230 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 DUSP21Q9H596 190 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 RDH14Q9HBH5 336 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 SDHAF2Q9NX18 166 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 TAS2R1Q9NYW7 299 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 AP3M1Q9Y2T2 418 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 CARHSP1Q9Y2V2 147 aaKnown RBP1.53□□□□□ -2.16
CD46-215ENST00000488596 BZW2Q9Y6E2 419 aaKnown RBP1.53□□□□□ -2.16
CD46-215ENST00000488596 R4GN34 69 aa1.53□□□□□ -2.16
CD46-215ENST00000488596 COL5A1P20908 1838 aaPredicted RBP1.52□□□□□ -2.17
CD46-215ENST00000488596 IGLL5B9A064 214 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 C9JQL5 133 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 ISLRO14498 428 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 RGS5O15539 181 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 GATCO43716 136 aaKnown RBP1.52□□□□□ -2.17
CD46-215ENST00000488596 SC5DO75845 299 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 TRGV3P03979 118 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 M6PRP20645 277 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 PRPS1L1P21108 318 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 GPR4P46093 362 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 NUDT2P50583 147 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 CARD18P57730 90 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 GPR176Q14439 515 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 TOMM34Q15785 309 aaPredicted RBP1.52□□□□□ -2.17
CD46-215ENST00000488596 PYDC2Q56P42 97 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 CLLU1OSQ5K130 101 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 WDR59Q6PJI9 974 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 PID1Q7Z2X4 250 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 OR52K1Q8NGK4 314 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 OR13C9Q8NGT0 318 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 OR6N2Q8NGY6 317 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 CLHC1Q8NHS4 586 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 OTUB2Q96DC9 234 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 ZBED3Q96IU2 234 aaPredicted RBP1.52□□□□□ -2.17
CD46-215ENST00000488596 ZNF396Q96N95 335 aaPredicted RBP1.52□□□□□ -2.17
CD46-215ENST00000488596 RILPQ96NA2 401 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 QKIQ96PU8 341 aaKnown RBP eCLIP1.52□□□□□ -2.174e-11■■■■□ 24.8
CD46-215ENST00000488596 SHCBP1LQ9BZQ2 653 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 SYT4Q9H2B2 425 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 ACOT13Q9NPJ3 140 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 ASF1BQ9NVP2 202 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 STMN3Q9NZ72 180 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 TAC3Q9UHF0 121 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 ZNF780BQ9Y6R6 833 aa1.52□□□□□ -2.17
CD46-215ENST00000488596 SHROOM3Q8TF72 1996 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 KIR2DS1A0A191URI9 304 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 OR2AT4A6NND4 320 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 H3BQ85 93 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 PRMT5O14744 637 aaPredicted RBP1.51□□□□□ -2.17
CD46-215ENST00000488596 TCAPO15273 167 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 COX7A2P2O60397 106 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 ENTPD6O75354 484 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 IGHMP01871 453 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 IMPA1P29218 277 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 MEF2BQ02080 365 aaPredicted RBP1.51□□□□□ -2.17
CD46-215ENST00000488596 TMEM241Q24JQ0 296 aa1.51□□□□□ -2.17
CD46-215ENST00000488596 ZNF404Q494X3 552 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms