RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 INTS14Q96SY0 518 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 GON7Q9BXV9 100 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 EGLN3Q9H6Z9 239 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 NDUFAF4Q9P032 175 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 GMPR2Q9P2T1 348 aaKnown RBP7.26□□□□□ -1.25
COL17A1-207ENST00000488320 LINC00312Q9Y6C7 94 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 ALMS1Q8TCU4 4167 aa7.26□□□□□ -1.25
COL17A1-207ENST00000488320 TRIM64CA6NLI5 447 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 H3BSH0 61 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 J3QT63 122 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 SAP30O75446 220 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 GADD45GO95257 159 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 NRASP01111 189 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 IGHG2P01859 326 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 CLUP10909 449 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 TMEM11P17152 192 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 SPI1P17947 270 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 OPRL1P41146 370 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 LIPEQ05469 1076 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 KPNB1Q14974 876 aaKnown RBP7.25□□□□□ -1.25
COL17A1-207ENST00000488320 GRK1Q15835 563 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 COQ5Q5HYK3 327 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 BAIAP2L2Q6UXY1 529 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 ASRGL1Q7L266 308 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 OR8H2Q8N162 312 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 C5orf56Q8N8D9 126 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 OR8B12Q8NGG6 310 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 OTULINQ96BN8 352 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 HRASLS5Q96KN8 279 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.25□□□□□ -1.25
COL17A1-207ENST00000488320 GLS2Q9UI32 602 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 PIGLQ9Y2B2 252 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 AP3M1Q9Y2T2 418 aa7.25□□□□□ -1.25
COL17A1-207ENST00000488320 V9GYY5 206 aaPredicted RBP7.25□□□□□ -1.25
COL17A1-207ENST00000488320 A0A0G2JND7 137 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 LINC01548A6NM66 108 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 BBIP1A8MTZ0 92 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 BUB1B-PAK6H3BSN5 160 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 AP4M1O00189 453 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 CCRL2O00421 344 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 FGF16O43320 207 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 ZNF737O75373 536 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 INMTO95050 263 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 LYNP07948 512 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 ELANEP08246 267 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 GABRR1P24046 479 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 GSTT1P30711 240 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 TSPAN31Q12999 210 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 CRMP1Q14194 572 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 MAPRE2Q15555 327 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 PRAMEF5Q5TYX0 476 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 SLX4IPQ5VYV7 408 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 TCF23Q7RTU1 214 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 THNSL2Q86YJ6 484 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 ST6GALNAC6Q969X2 333 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 RPEQ96AT9 228 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 AMELYQ99218 206 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 SPATA25Q9BR10 227 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 CHST6Q9GZX3 395 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 GAL3ST2Q9H3Q3 398 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 ISYNA1Q9NPH2 558 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 GPR173Q9NS66 373 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 CMTM6Q9NX76 183 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 ENPP5Q9UJA9 477 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.24□□□□□ -1.25
COL17A1-207ENST00000488320 KIAA2026Q5HYC2 2103 aa7.24□□□□□ -1.25
COL17A1-207ENST00000488320 TMEM82A0PJX8 343 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 NCBP2LA6PVI3 153 aaKnown RBP7.23□□□□□ -1.25
COL17A1-207ENST00000488320 OOSP1A8MZH6 123 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 PRR23D1E9PI22 279 aaPredicted RBP7.23□□□□□ -1.25
COL17A1-207ENST00000488320 LY6G6CO95867 125 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 IGLV1-47P01700 117 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 OR8U8P0C7N1 319 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 PRR23D2P0DMB1 279 aaPredicted RBP7.23□□□□□ -1.25
COL17A1-207ENST00000488320 ATP6V1B1P15313 513 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 NCK1P16333 377 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 CDK2P24941 298 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 GSSP48637 474 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 ESRRGP62508 458 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 GABPB1Q06547 395 aaPredicted RBP7.23□□□□□ -1.25
COL17A1-207ENST00000488320 FOXE3Q13461 319 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 HLA-DRB5Q30154 266 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 SAMD4BQ5PRF9 694 aaKnown RBP7.23□□□□□ -1.25
COL17A1-207ENST00000488320 LCN1P1Q5VSP4 162 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 METTL21CQ5VZV1 264 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 RPL13AP3Q6NVV1 102 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 SATL1Q86VE3 508 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 ANGPTL5Q86XS5 388 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 SGPP2Q8IWX5 399 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 OR6Q1Q8NGQ2 317 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 OR1N2Q8NGR9 330 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 OR56B4Q8NH76 319 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 C4orf3Q8WVX3 66 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 STON2Q8WXE9 905 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 TOMM40LQ969M1 308 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 TLCD1Q96CP7 247 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 FUZQ9BT04 418 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 PARD6BQ9BYG5 372 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 GHITMQ9H3K2 345 aa7.23□□□□□ -1.25
COL17A1-207ENST00000488320 CCDC134Q9H6E4 229 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms