RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 UPK1AO00322 258 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 CASC3O15234 703 aaKnown RBP1.2□□□□□ -2.22
CCDC66-221ENST00000487739 RNF113AO15541 343 aaKnown RBP1.2□□□□□ -2.22
CCDC66-221ENST00000487739 OR2A4O95047 310 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 PLEKHA8P1O95397 391 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 SFTPCP11686 197 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 FOXA1P55317 472 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 RPL31P62899 125 aaKnown RBP1.2□□□□□ -2.22
CCDC66-221ENST00000487739 SLC35B1P78383 322 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 TRDNQ13061 729 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 ATP6V1FQ16864 119 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 NDUFAF6Q330K2 333 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 MRPL2Q5T653 305 aaKnown RBP1.2□□□□□ -2.22
CCDC66-221ENST00000487739 CLEC19AQ6UXS0 136 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 ASCL4Q6XD76 172 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 FAM231DQ6ZW35 169 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 SLC35D2Q76EJ3 337 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 CCNYL1Q8N7R7 359 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 ZNF555Q8NEP9 628 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 OR2K2Q8NGT1 345 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 OR5H2Q8NGV7 314 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 OR8S1Q8NH09 359 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 YIPF5Q969M3 257 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 ZNF75AQ96N20 296 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 OR2A7Q96R45 310 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 METTL26Q96S19 204 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 TSNAXQ99598 290 aaKnown RBP1.2□□□□□ -2.22
CCDC66-221ENST00000487739 THTPAQ9BU02 230 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 TMED9Q9BVK6 235 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 SRRQ9GZT4 340 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 IL22Q9GZX6 179 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 ABCG5Q9H222 651 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 FBXO44Q9H4M3 255 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 ASB7Q9H672 318 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 CRLF2Q9HC73 371 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 C6orf50Q9HD87 102 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 RPRD1BQ9NQG5 326 aaKnown RBP1.2□□□□□ -2.22
CCDC66-221ENST00000487739 DDIT4Q9NX09 232 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 PRO0628Q9UI54 55 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 INSIG2Q9Y5U4 225 aa1.2□□□□□ -2.22
CCDC66-221ENST00000487739 ZNF706Q9Y5V0 76 aaPredicted RBP1.2□□□□□ -2.22
CCDC66-221ENST00000487739 C9JQL5 133 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 RGS5O15539 181 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 ETHE1O95571 254 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 OR5AL1P0C617 328 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 IVDP26440 423 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 TMEM241Q24JQ0 296 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 CDNFQ49AH0 187 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 DUPD1Q68J44 220 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 SETD3Q86TU7 594 aaPredicted RBP1.19□□□□□ -2.22
CCDC66-221ENST00000487739 AMN1Q8IY45 258 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 EIF4E3Q8N5X7 224 aaKnown RBP1.19□□□□□ -2.22
CCDC66-221ENST00000487739 OR51L1Q8NGJ5 315 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 NT5CQ8TCD5 201 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 ZFAND1Q8TCF1 268 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 CENPNQ96H22 339 aaPredicted RBP1.19□□□□□ -2.22
CCDC66-221ENST00000487739 ANP32EQ9BTT0 268 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 BEX2Q9BXY8 128 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 PARP11Q9NR21 331 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 RBM22Q9NW64 420 aaKnown RBP eCLIP1.19□□□□□ -2.22
CCDC66-221ENST00000487739 RAB23Q9ULC3 237 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 MCTS1Q9ULC4 181 aaKnown RBP1.19□□□□□ -2.22
CCDC66-221ENST00000487739 TFR2Q9UP52 801 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 ACOT9Q9Y305 439 aa1.19□□□□□ -2.22
CCDC66-221ENST00000487739 A0A0B4J2C4 111 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 ZNF729A6NN14 1252 aaPredicted RBP1.18□□□□□ -2.22
CCDC66-221ENST00000487739 GGTLC3B5MD39 225 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 H7C2Y5 167 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 M0R1B8 84 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 MBP02144 154 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 SNRPAP09012 282 aaKnown RBP1.18□□□□□ -2.22
CCDC66-221ENST00000487739 LIPCP11150 499 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 ZNF708P17019 499 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 MSR1P21757 451 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 NUDT2P50583 147 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 ENDOGQ14249 297 aaKnown RBP1.18□□□□□ -2.22
CCDC66-221ENST00000487739 SSX1Q16384 188 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 LGALSLQ3ZCW2 172 aaPredicted RBP1.18□□□□□ -2.22
CCDC66-221ENST00000487739 CLEC18BQ6UXF7 455 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 LINC00523Q86TU6 105 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 ARHGAP18Q8N392 663 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 C22orf15Q8WYQ4 148 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 TOP1MTQ969P6 601 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 COA1Q9GZY4 146 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 SLC38A1Q9H2H9 487 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 NLE1Q9NVX2 485 aaPredicted RBP1.18□□□□□ -2.22
CCDC66-221ENST00000487739 TAC3Q9UHF0 121 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 SLC7A11Q9UPY5 501 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 CFL2Q9Y281 166 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 CACNA1SQ13698 1873 aa1.18□□□□□ -2.22
CCDC66-221ENST00000487739 SPATA31E1Q6ZUB1 1445 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 TRAV8-7A0A075B6U6 113 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 LOC389332A0A1B0GUA5 103 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 TVP23AA6NH52 213 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 A8MWP4 228 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 D6RAR5 112 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 K7EN84 100 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 SYNGR2O43760 224 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 GMDSO60547 372 aa1.17□□□□□ -2.22
CCDC66-221ENST00000487739 IGKV1D-33P01593 117 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms