RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 NPFFR1Q9GZQ6 430 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 ZNF702PQ9H963 129 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 SLC7A11Q9UPY5 501 aa9.86□□□□□ -0.83
VPS16-208ENST00000487461 TMEM82A0PJX8 343 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 METTL15A6NJ78 407 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 ODF3BA8MYP8 253 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 SYT7O43581 403 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 APOL3O95236 402 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 KRT8P05787 483 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 OR2T7P0C7T2 308 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 ZNF728P0DKX0 622 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 HTR1FP30939 366 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 EDDM3BP56851 147 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 HABP2Q14520 560 aaPredicted RBP9.85□□□□□ -0.83
VPS16-208ENST00000487461 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 AMIGO2Q86SJ2 522 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 GID4Q8IVV7 300 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 LYG1Q8N1E2 194 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 Q8N2B8 174 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 PRSS35Q8N3Z0 413 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 ASCC1Q8N9N2 400 aaKnown RBP9.85□□□□□ -0.83
VPS16-208ENST00000487461 OR11H6Q8NGC7 330 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 SLAMF9Q96A28 289 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 MALSU1Q96EH3 234 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 CEP19Q96LK0 163 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 GABARAPL1Q9H0R8 117 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 SERTAD4Q9NUC0 356 aa9.85□□□□□ -0.83
VPS16-208ENST00000487461 WARS2Q9UGM6 360 aaKnown RBP9.85□□□□□ -0.83
VPS16-208ENST00000487461 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS16-208ENST00000487461 NOTCH3Q9UM47 2321 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 A6NDX4 124 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 SULT1C4O75897 302 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 IGHV1-8P0DP01 117 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 FUT6P51993 359 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 FAM189A2Q15884 450 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 SSX2Q16385 188 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 SAMD5Q5TGI4 173 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 ZNF626Q68DY1 528 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 SLC25A26Q70HW3 274 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 GDPD3Q7L5L3 318 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 TCF23Q7RTU1 214 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 TMEM219Q86XT9 240 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 ZDHHC13Q8IUH4 622 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 EGFL6Q8IUX8 553 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 RDH10Q8IZV5 341 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 DTX3Q8N9I9 347 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 OR10H4Q8NGA5 316 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 OR13D1Q8NGV5 346 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
VPS16-208ENST00000487461 SNX22Q96L94 193 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 CDCA4Q9BXL8 241 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 IL36RNQ9UBH0 155 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 TCF19Q9Y242 345 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 TBL2Q9Y4P3 447 aaKnown RBP9.84□□□□□ -0.83
VPS16-208ENST00000487461 AP4S1Q9Y587 144 aa9.84□□□□□ -0.83
VPS16-208ENST00000487461 IGHA1P01876 353 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 RBP4P02753 201 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 PRB2P02812 416 aaPredicted RBP9.83□□□□□ -0.84
VPS16-208ENST00000487461 CD28P10747 220 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 JUNBP17275 347 aaPredicted RBP9.83□□□□□ -0.84
VPS16-208ENST00000487461 FASP25445 335 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 KIR3DL2P43630 455 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 NPBWR2P48146 333 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 ZNF85Q03923 595 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 MEF2CQ06413 473 aaPredicted RBP9.83□□□□□ -0.84
VPS16-208ENST00000487461 BNIP1Q12981 228 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 DYNC1I2Q13409 638 aaKnown RBP9.83□□□□□ -0.84
VPS16-208ENST00000487461 CNN3Q15417 329 aaKnown RBP9.83□□□□□ -0.84
VPS16-208ENST00000487461 NSUN5P1Q3KNT7 163 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
VPS16-208ENST00000487461 Q6ZS46 218 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 OR8H2Q8N162 312 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 OR52N4Q8NGI2 321 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 RPS4Y2Q8TD47 263 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 EME1Q96AY2 570 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 CIB1Q99828 191 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 ADI1Q9BV57 179 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 CHST5Q9GZS9 411 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 PLEKHA1Q9HB21 404 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 SEBOXQ9HB31 216 aaPredicted RBP9.83□□□□□ -0.84
VPS16-208ENST00000487461 ABCB10Q9NRK6 738 aa9.83□□□□□ -0.84
VPS16-208ENST00000487461 PLXNB1O43157 2135 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 GATBO75879 557 aaKnown RBP9.82□□□□□ -0.84
VPS16-208ENST00000487461 HAND1O96004 215 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 SERPINA3P01011 423 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 DUSP1P28562 367 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 BLCAPP62952 87 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 EDDM3AQ14507 147 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 TP53I3Q53FA7 332 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 TPRX1Q8N7U7 411 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 CCDC54Q8NEL0 328 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 WIPF2Q8TF74 440 aaPredicted RBP9.82□□□□□ -0.84
VPS16-208ENST00000487461 EMG1Q92979 244 aaKnown RBP9.82□□□□□ -0.84
VPS16-208ENST00000487461 FOXRED1Q96CU9 486 aaPredicted RBP9.82□□□□□ -0.84
VPS16-208ENST00000487461 ADAT3Q96EY9 351 aaPredicted RBP9.82□□□□□ -0.84
VPS16-208ENST00000487461 BORCS8Q96FH0 119 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 ZNF714Q96N38 554 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 CHST6Q9GZX3 395 aa9.82□□□□□ -0.84
VPS16-208ENST00000487461 RBFOX1Q9NWB1 397 aaKnown RBP9.82□□□□□ -0.84
VPS16-208ENST00000487461 HILPDAQ9Y5L2 63 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms