RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SAXO1Q8IYX7 474 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 PNLDC1Q8NA58 520 aaKnown RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 POC1AQ8NBT0 407 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 OR51D1Q8NGF3 324 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 DYNC2LI1Q8TCX1 351 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 CPNE2Q96FN4 548 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 CEP19Q96LK0 163 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 NRIP2Q9BQI9 281 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 WDR13Q9H1Z4 485 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 ELL3Q9HB65 397 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 SMURF1Q9HCE7 757 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 RBFOX1Q9NWB1 397 aaKnown RBP10.73□□□□□ -0.69
HDAC6-229ENST00000486665 STEAP1Q9UHE8 339 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 POLDIP2Q9Y2S7 368 aa10.73□□□□□ -0.69
HDAC6-229ENST00000486665 HIVEP2P31629 2446 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 INAFM1C9JVW0 142 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 TRAPPC2LH3BP13 241 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 CYB5AP00167 134 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 IRF2P14316 349 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 SNRPBP14678 240 aaKnown RBP10.72□□□□□ -0.69
HDAC6-229ENST00000486665 CFPP27918 469 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 CD80P33681 288 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 RORCP51449 518 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 QRFPP83859 136 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 RSU1Q15404 277 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 CARTPTQ16568 116 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 SLC22A6Q4U2R8 563 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 METAP1DQ6UB28 335 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-229ENST00000486665 ZNF525Q8N782 197 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 TBC1D15Q8TC07 691 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 FAM3DQ96BQ1 224 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 METTL9Q9H1A3 318 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 HES4Q9HCC6 221 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 IL36RNQ9UBH0 155 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 OR5V1Q9UGF6 321 aa10.72□□□□□ -0.69
HDAC6-229ENST00000486665 CHD3Q12873 2000 aaKnown RBP10.72□□□□□ -0.69
HDAC6-229ENST00000486665 IGHV3OR15-7A0A075B7D8 119 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 LRRC30A6NM36 301 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 SRRM5B3KS81 715 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 IFNL4K9M1U5 179 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 LDLRAD4O15165 306 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 HTR3BO95264 441 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 BPNT1O95861 308 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 PAHP00439 452 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 TFF1P04155 84 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 VSIG8P0DPA2 414 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 ARSBP15848 533 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 ZNF182P17025 639 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-229ENST00000486665 SONP18583 2426 aaKnown RBP10.71□□□□□ -0.69
HDAC6-229ENST00000486665 GLRA1P23415 457 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 SFRP4Q6FHJ7 346 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-229ENST00000486665 LRRC75A-AS1Q8N1F1 130 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 TMEM104Q8NE00 496 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 DEFB108BQ8NET1 73 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 Q8NFD4 153 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 OR5H6Q8NGV6 325 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 HPS1Q92902 700 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 S100A13Q99584 98 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 DCUN1D5Q9BTE7 237 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 BANF2Q9H503 90 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 CHODLQ9H9P2 273 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 LIN7BQ9HAP6 207 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 BARX1Q9HBU1 254 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-229ENST00000486665 MXRA5Q9NR99 2828 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 IL36GQ9NZH8 169 aa10.71□□□□□ -0.69
HDAC6-229ENST00000486665 STAB1Q9NY15 2570 aa10.71□□□□□ -0.7
HDAC6-229ENST00000486665 DYSFO75923 2080 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 TMEM272A0A1B0GTI8 110 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 TMEM14DPA8MWL7 114 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 PPIHO43447 177 aaKnown RBP10.7□□□□□ -0.7
HDAC6-229ENST00000486665 NXPH2O95156 264 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 UBBP0CG47 229 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 SERPINA2P20848 420 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 EFNB2P52799 333 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 SNU13P55769 128 aaKnown RBP10.7□□□□□ -0.7
HDAC6-229ENST00000486665 TMEM33P57088 247 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 UNC119Q13432 240 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 PDCD1Q15116 288 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 ZMYND11Q15326 602 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 DGUOKQ16854 277 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 AVPI1Q5T686 147 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 ELP2Q6IA86 826 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 ACP7Q6ZNF0 438 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 CROCCP3Q8IVE0 287 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 FAM58AQ8N1B3 248 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 OR5T2Q8NGG2 359 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 EMG1Q92979 244 aaKnown RBP10.7□□□□□ -0.7
HDAC6-229ENST00000486665 FAM46BQ96A09 425 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 TMEM165Q9HC07 324 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 HMG20AQ9NP66 347 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 RASL12Q9NYN1 266 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 GHRLQ9UBU3 117 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 NPTNQ9Y639 398 aa10.7□□□□□ -0.7
HDAC6-229ENST00000486665 PPIAL4EA0A075B759 164 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 OOEPA6NGQ2 149 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 CLDN25C9JDP6 229 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 PPIAL4DF5H284 164 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 LGALS8O00214 317 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 CRTAPO75718 401 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-229ENST00000486665 MPIG6BO95866 241 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms