RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 HCKP08631 526 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 IGHV4-38-2P0DP08 117 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 MMP9P14780 707 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 CEBPDP49716 269 aaPredicted RBP15.03■□□□□ -0
COL1A1-207ENST00000486572 CAPZA1P52907 286 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 PDZK1IP1Q13113 114 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 NANOGP1Q8N7R0 232 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 ZFP41Q8N8Y5 198 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 C8orf46Q8TAG6 207 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 C22orf15Q8WYQ4 148 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 GHSRQ92847 366 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 EMG1Q92979 244 aaKnown RBP15.03■□□□□ -0
COL1A1-207ENST00000486572 TMEM106AQ96A25 262 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 RFT1Q96AA3 541 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 SPACA5Q96QH8 159 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 MDFIQ99750 246 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 SUCNR1Q9BXA5 334 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 SIRPDQ9H106 197 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 ZNF69Q9UC07 566 aa15.03■□□□□ -0
COL1A1-207ENST00000486572 FBN1P35555 2871 aaKnown RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 IGHV3OR16-10A0A075B7F0 116 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 SPRY1O43609 319 aaPredicted RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 RGS9O75916 674 aaPredicted RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 RAB3AP20336 220 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 ARF6P62330 175 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 SRSF2Q01130 221 aaKnown RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 YIF1BQ5BJH7 314 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 RNLSQ5VYX0 342 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 ZNF529Q6P280 563 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 FIP1L1Q6UN15 594 aaKnown RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 USP43Q70EL4 1123 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 KIR3DL3Q8N743 410 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 OR5D18Q8NGL1 313 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 TMEM158Q8WZ71 300 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 CPNE2Q96FN4 548 aaPredicted RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 PGLYRP3Q96LB9 341 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 TBX15Q96SF7 602 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 MND1Q9BWT6 205 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 CDCA4Q9BXL8 241 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 ELL3Q9HB65 397 aaPredicted RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 PAK1IP1Q9NWT1 392 aaPredicted RBP15.02■□□□□ -0
COL1A1-207ENST00000486572 TAS2R4Q9NYW5 299 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 ONECUT1Q9UBC0 465 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 TPRKBQ9Y3C4 175 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 KPTNQ9Y664 436 aa15.02■□□□□ -0
COL1A1-207ENST00000486572 TRBV23-1A0A0A0MS06 115 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 RNF212BA8MTL3 300 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 BCL3P20749 454 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 VHLP40337 213 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 NPBWR2P48146 333 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 HILS1P60008 231 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 SLC35A2P78381 396 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 KISS1Q15726 138 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 GPR157Q5UAW9 335 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 ASPHD2Q6ICH7 369 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 CRIP3Q6Q6R5 217 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 RNF144BQ7Z419 303 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 CMTM4Q8IZR5 234 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 OR13C5Q8NGS8 318 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 MS4A7Q9GZW8 240 aaPredicted RBP15.01□□□□□ -0.01
COL1A1-207ENST00000486572 RBFOX1Q9NWB1 397 aaKnown RBP15.01□□□□□ -0.01
COL1A1-207ENST00000486572 PCDHGB5Q9Y5G0 923 aa15.01□□□□□ -0.01
COL1A1-207ENST00000486572 IGKV1-12A0A0C4DH73 117 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 TRBV5-5A0A0J9YX44 114 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 PNMA8CA0A1B0GUJ8 204 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 A0A1W2PQ09 198 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 MAGEB3O15480 346 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 ANGPTL7O43827 346 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 IGKV1D-12P01611 117 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 PPP3R1P63098 170 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 BDH1Q02338 343 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 COL10A1Q03692 680 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 DOC2BQ14184 412 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 PDCD1Q15116 288 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 KRTAP24-1Q3LI83 254 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 Q499Y3 187 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 C9orf139Q6ZV77 190 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 SAXO1Q8IYX7 474 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 FAM58AQ8N1B3 248 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 OR51A2Q8NGJ7 313 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 SGCDQ92629 289 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 CNBD2Q96M20 576 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 JMJD8Q96S16 334 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 FAM234AQ9H0X4 552 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 IL36RNQ9UBH0 155 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 RAB26Q9ULW5 256 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 COL6A5A8TX70 2615 aa15□□□□□ -0.01
COL1A1-207ENST00000486572 KDM4BO94953 1096 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 VENTXO95231 258 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 TK1P04183 234 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 CD1AP06126 327 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 CHRM2P08172 466 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 PRKACAP17612 351 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 CELP19835 753 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 BPIFB3P59826 476 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 ZP1P60852 638 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 RPS11P62280 158 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL1A1-207ENST00000486572 TUSC1Q2TAM9 212 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 SPIN3Q5JUX0 258 aa14.99□□□□□ -0.01
COL1A1-207ENST00000486572 BCL6BQ8N143 479 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms