RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TIMD4Q96H15 378 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 Q96MF0 132 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 KCTD7Q96MP8 289 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 PIMREGQ9BSJ6 248 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 BPESC1Q9GZL8 116 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 CNTD2Q9H8S5 307 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 CHODLQ9H9P2 273 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 SMURF1Q9HCE7 757 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 DLL4Q9NR61 685 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 RNF7Q9UBF6 113 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 OR14J1Q9UGF5 321 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 PCDHB10Q9UN67 800 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 MRPS28Q9Y2Q9 187 aaKnown RBP4.73□□□□□ -1.65
COPS3-208ENST00000486032 POLDIP2Q9Y2S7 368 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 NPTNQ9Y639 398 aa4.73□□□□□ -1.65
COPS3-208ENST00000486032 CCDC168Q8NDH2 2452 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 TEP1Q99973 2627 aaKnown RBP4.72□□□□□ -1.65
COPS3-208ENST00000486032 PPIAL4EA0A075B759 164 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 IGKV1-12A0A0C4DH73 117 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 A0A1B0GWJ7 208 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 TRIM64BA6NI03 449 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PPIAL4DF5H284 164 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 TMEM178BH3BS89 294 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 IGKV1D-12P01611 117 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 GYPAP02724 150 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 CSTBP04080 98 aaKnown RBP4.72□□□□□ -1.65
COPS3-208ENST00000486032 ALDOBP05062 364 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PPIAL4FP0DN26 164 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 SLC2A2P11168 524 aaPredicted RBP4.72□□□□□ -1.65
COPS3-208ENST00000486032 PRKACAP17612 351 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 DUSP1P28562 367 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PTGFRP43088 359 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 NPBWR2P48146 333 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 CEBPDP49716 269 aaPredicted RBP4.72□□□□□ -1.65
COPS3-208ENST00000486032 BTG1P62324 171 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 IL24Q13007 206 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PDZK1IP1Q13113 114 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 RIN1Q13671 783 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 RSU1Q15404 277 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 RAB11BQ15907 218 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 SLC22A6Q4U2R8 563 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 IDNKQ5T6J7 187 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 OR10K2Q6IF99 312 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 CD200R1LQ6Q8B3 271 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 KRT74Q7RTS7 529 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 C1QL2Q7Z5L3 287 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 ANKRD13BQ86YJ7 626 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 LRRC75A-AS1Q8N1F1 130 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 GCSAMQ8N6F7 178 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 NKAIN3Q8N8D7 197 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 POC1AQ8NBT0 407 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 WFDC11Q8NEX6 87 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 OR4D6Q8NGJ1 314 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PHYHIPQ92561 330 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 ERGIC1Q969X5 290 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 FAM46BQ96A09 425 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 MBD6Q96DN6 1003 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 CPNE2Q96FN4 548 aaPredicted RBP4.72□□□□□ -1.65
COPS3-208ENST00000486032 CEP19Q96LK0 163 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 CCL13Q99616 98 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 GFI1Q99684 422 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PKIBQ9C010 78 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 METTL9Q9H1A3 318 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 KCNK15Q9H427 330 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 BANF2Q9H503 90 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 RBFOX1Q9NWB1 397 aaKnown RBP4.72□□□□□ -1.65
COPS3-208ENST00000486032 ING3Q9NXR8 418 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 MTCH1Q9NZJ7 389 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 DAPK2Q9UIK4 370 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 WIPI2Q9Y4P8 454 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PPIAL4AQ9Y536 164 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 V9GY05 133 aa4.72□□□□□ -1.65
COPS3-208ENST00000486032 PRRC2AP48634 2157 aaKnown RBP4.72□□□□□ -1.65
COPS3-208ENST00000486032 ARID1AO14497 2285 aa4.71□□□□□ -1.65
COPS3-208ENST00000486032 HIVEP1P15822 2718 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 A0A0B4J203 849 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 TRAV1-2A0A0B4J238 106 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 TRAV38-1A0A0B4J264 116 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 IGHV4-61A0A0C4DH41 118 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 A0A1B0GW55 424 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 A0A1W2PP11 408 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 OOEPA6NGQ2 149 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 RFPL4AA6NLU0 287 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 SRRM5B3KS81 715 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 RFPL4AL1F8VTS6 287 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 F8VVB4 439 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 F8VWA3 439 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 LGALS8O00214 317 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 ADAM20O43506 726 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 EIF4EBP3O60516 100 aaPredicted RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 RP2O75695 350 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 CRTAPO75718 401 aaPredicted RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 PTBP3O95758 552 aaKnown RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 MPIG6BO95866 241 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 SFTPBP07988 381 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 CSF3P09919 207 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DUX4L2P0CJ85 424 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DUX4L3P0CJ86 424 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DUX4L4P0CJ87 422 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms