RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SLC37A4O43826 429 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 HLA-DQB1P01920 261 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 SLC35E2BP0CK96 405 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 MUC1P15941 1255 aaPredicted RBP2.2□□□□□ -2.06
SMC4-215ENST00000484799 PSMB9P28065 219 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 MPIP34949 423 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 OR2B6P58173 313 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 TAS2R43P59537 309 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 RPL10AP62906 217 aaKnown RBP2.2□□□□□ -2.06
SMC4-215ENST00000484799 CD164Q04900 197 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 ZNF816Q0VGE8 651 aaPredicted RBP2.2□□□□□ -2.06
SMC4-215ENST00000484799 PMVKQ15126 192 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 TRAM1Q15629 374 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 CEACAM16Q2WEN9 425 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 TMEM249Q2WGJ8 235 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 RBM48Q5RL73 367 aaKnown RBP2.2□□□□□ -2.06
SMC4-215ENST00000484799 Q6ZT83 130 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 FAM231DQ6ZW35 169 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 TMEM25Q86YD3 366 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 IQCF2Q8IXL9 164 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 CYP4Z2PQ8N1L4 340 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 CCNYL1Q8N7R7 359 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 ZNF615Q8N8J6 731 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 OR2M7Q8NG81 312 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 OR4K2Q8NGD2 314 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 UBA3Q8TBC4 463 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 SPACA5Q96QH8 159 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 HBEGFQ99075 208 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 CDX2Q99626 313 aaPredicted RBP2.2□□□□□ -2.06
SMC4-215ENST00000484799 PITX2Q99697 317 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 RNF5Q99942 180 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 DSN1Q9H410 356 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 WFDC1Q9HC57 220 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 PARP11Q9NR21 331 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 RBM22Q9NW64 420 aaKnown RBP eCLIP2.2□□□□□ -2.06
SMC4-215ENST00000484799 STX18Q9P2W9 335 aaKnown RBP2.2□□□□□ -2.06
SMC4-215ENST00000484799 ADAMTSL3P82987 1691 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 KIAA0232Q92628 1395 aa2.2□□□□□ -2.06
SMC4-215ENST00000484799 TNS2Q63HR2 1409 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 C9JQL5 133 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 F8VZ95 297 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 MKRN2OSH3BPM6 223 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 CDIPTO14735 213 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 CCNKO75909 580 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 MYO1DO94832 1006 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 IGKV1D-16P01601 117 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 RLN2P04090 185 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 IL4P05112 153 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 CDK1P06493 297 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 ZNF806P0C7X5 589 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 NELFEP18615 380 aaKnown RBP2.19□□□□□ -2.06
SMC4-215ENST00000484799 TAC1P20366 129 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 NPY1RP25929 384 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 UGT2B10P36537 528 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 CRATP43155 626 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 TUFMP49411 452 aaKnown RBP2.19□□□□□ -2.06
SMC4-215ENST00000484799 BTN1A1Q13410 526 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 ZBTB6Q15916 424 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 COX19Q49B96 90 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 HSP90B2PQ58FF3 399 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 KCTD16Q68DU8 428 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 MORN3Q6PF18 240 aaPredicted RBP2.19□□□□□ -2.06
SMC4-215ENST00000484799 SHISA6Q6ZSJ9 500 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 CRLF3Q8IUI8 442 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 ZNF695Q8IW36 515 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 LRRC52Q8N7C0 313 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 SLC26A10Q8NG04 563 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 OR2Z1Q8NG97 314 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 OR7G1Q8NGA0 311 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 BLNKQ8WV28 456 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 ZMYND19Q96E35 227 aaPredicted RBP2.19□□□□□ -2.06
SMC4-215ENST00000484799 RBMXL1Q96E39 390 aaKnown RBP2.19□□□□□ -2.06
SMC4-215ENST00000484799 ZNF649Q9BS31 505 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 LHX5Q9H2C1 402 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 MS4A12Q9NXJ0 267 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 ENPP5Q9UJA9 477 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 INSIG2Q9Y5U4 225 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 URGCP-MRPS24S4R325 110 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 DYSFO75923 2080 aa2.19□□□□□ -2.06
SMC4-215ENST00000484799 NRCAMQ92823 1304 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 TSPOAP1O95153 1857 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 DOCK8Q8NF50 2099 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 C7orf66A4D0T2 115 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 CD300LBA8K4G0 201 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 ZNF850A8MQ14 1090 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 CALUO43852 315 aaPredicted RBP2.18□□□□□ -2.06
SMC4-215ENST00000484799 SHOX2O60902 331 aaPredicted RBP2.18□□□□□ -2.06
SMC4-215ENST00000484799 CDK14O94921 469 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 TNFAIP8O95379 198 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 SNAP29O95721 258 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 SYT1P21579 422 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 KDELR2P33947 212 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 MAGEA6P43360 314 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 GCLMP48507 274 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 NUDT2P50583 147 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 PITPNAQ00169 270 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 BAXQ07812 192 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 CDC20Q12834 499 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 BNIP2Q12982 314 aa2.18□□□□□ -2.06
SMC4-215ENST00000484799 SLAMF1Q13291 335 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms