RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 KLHDC1Q8N7A1 406 aa17.47■□□□□ 0.39
USP40-215ENST00000484528 PIFOQ8TCI5 191 aa17.47■□□□□ 0.39
USP40-215ENST00000484528 EME1Q96AY2 570 aa17.47■□□□□ 0.39
USP40-215ENST00000484528 ADI1Q9BV57 179 aa17.47■□□□□ 0.39
USP40-215ENST00000484528 GABARAPL3Q9BY60 117 aa17.47■□□□□ 0.39
USP40-215ENST00000484528 IL36RNQ9UBH0 155 aa17.47■□□□□ 0.39
USP40-215ENST00000484528 GNG8Q9UK08 70 aa17.47■□□□□ 0.39
USP40-215ENST00000484528 C17orf98A8MV24 154 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 PLXNB1O43157 2135 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 ZNF737O75373 536 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 KIR3DL2P43630 455 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 KIR2DS4P43632 304 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 EDDM3AQ14507 147 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 HERPUD1Q15011 391 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 AANATQ16613 207 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 SLC25A26Q70HW3 274 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 GDPD3Q7L5L3 318 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 RDH10Q8IZV5 341 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 OR2T6Q8NHC8 308 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 BORCS8Q96FH0 119 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 CHST5Q9GZS9 411 aa17.46■□□□□ 0.39
USP40-215ENST00000484528 TMEM82A0PJX8 343 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 GATBO75879 557 aaKnown RBP17.45■□□□□ 0.38
USP40-215ENST00000484528 SULT1C4O75897 302 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 ARG1P05089 322 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 CHRM2P08172 466 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 RAB13P51153 203 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 FUT6P51993 359 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 ZNF85Q03923 595 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 TCF23Q7RTU1 214 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 FAM220AQ7Z4H9 259 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 OR8J1Q8NGP2 316 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 EMG1Q92979 244 aaKnown RBP17.45■□□□□ 0.38
USP40-215ENST00000484528 RAB18Q9NP72 206 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 NOTCH3Q9UM47 2321 aa17.45■□□□□ 0.38
USP40-215ENST00000484528 ZNF728P0DKX0 622 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 VSIG10L2P0DP72 767 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 CALCBP10092 127 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 POU3F4P49335 361 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 RASSF2P50749 326 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 SNU13P55769 128 aaKnown RBP17.44■□□□□ 0.38
USP40-215ENST00000484528 HABP2Q14520 560 aaPredicted RBP17.44■□□□□ 0.38
USP40-215ENST00000484528 FAM189A2Q15884 450 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 LDLRAD2Q5SZI1 272 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 EGFL6Q8IUX8 553 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 OR8H2Q8N162 312 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 TPRX1Q8N7U7 411 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 CENPNQ96H22 339 aaPredicted RBP17.44■□□□□ 0.38
USP40-215ENST00000484528 NPFFR1Q9GZQ6 430 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 CHST6Q9GZX3 395 aa17.44■□□□□ 0.38
USP40-215ENST00000484528 RANBP3Q9H6Z4 567 aaPredicted RBP17.44■□□□□ 0.38
USP40-215ENST00000484528 FAM90A8PA6NJQ4 464 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 ODF3BA8MYP8 253 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 IGHA1P01876 353 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 DUSP1P28562 367 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 NPBWR2P48146 333 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 DYNC1I2Q13409 638 aaKnown RBP17.43■□□□□ 0.38
USP40-215ENST00000484528 CNN3Q15417 329 aaKnown RBP17.43■□□□□ 0.38
USP40-215ENST00000484528 SSX2Q16385 188 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 TMEM219Q86XT9 240 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 OR13D1Q8NGV5 346 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 RFKQ969G6 155 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 RNF166Q96A37 237 aaPredicted RBP17.43■□□□□ 0.38
USP40-215ENST00000484528 ADAT3Q96EY9 351 aaPredicted RBP17.43■□□□□ 0.38
USP40-215ENST00000484528 OSBPL10Q9BXB5 764 aa17.43■□□□□ 0.38
USP40-215ENST00000484528 RBFOX1Q9NWB1 397 aaKnown RBP17.43■□□□□ 0.38
USP40-215ENST00000484528 HAND1O96004 215 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 SERPINA3P01011 423 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 UBCP0CG48 685 aaKnown RBP17.42■□□□□ 0.38
USP40-215ENST00000484528 IGHV1-8P0DP01 117 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 JUNBP17275 347 aaPredicted RBP17.42■□□□□ 0.38
USP40-215ENST00000484528 BCL3P20749 454 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 GABRR1P24046 479 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 CDC42P60953 191 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 ISL1P61371 349 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 CCBE1Q6UXH8 406 aaPredicted RBP17.42■□□□□ 0.38
USP40-215ENST00000484528 LYG1Q8N1E2 194 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 OR52N4Q8NGI2 321 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 SNX22Q96L94 193 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 ZNF714Q96N38 554 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 ABCB10Q9NRK6 738 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 TCF19Q9Y242 345 aa17.42■□□□□ 0.38
USP40-215ENST00000484528 TBL2Q9Y4P3 447 aaKnown RBP17.42■□□□□ 0.38
USP40-215ENST00000484528 IGKV1-9A0A0C4DH69 117 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 CIB2O75838 187 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 RBP2P50120 134 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 GRK1Q15835 563 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 ZNF626Q68DY1 528 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 LIAT1Q6ZQX7 453 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 CCDC54Q8NEL0 328 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 OR2G2Q8NGZ5 317 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 PYDC1Q8WXC3 89 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 RFT1Q96AA3 541 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 FOXRED1Q96CU9 486 aaPredicted RBP17.41■□□□□ 0.38
USP40-215ENST00000484528 ZNF702PQ9H963 129 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 IMPAD1Q9NX62 359 aa17.41■□□□□ 0.38
USP40-215ENST00000484528 VGLL3A8MV65 326 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 ENTPD6O75354 484 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 ATP5HO75947 161 aa17.4■□□□□ 0.38
USP40-215ENST00000484528 RBP4P02753 201 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms