RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 ST8SIA3O43173 380 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BKO60814 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BJP06899 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BOP23527 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BBP33778 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 AFF3P51826 1226 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BDP58876 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BCP62807 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 MRPS21P82921 87 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 IL13RA2Q14627 380 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 PPA1Q15181 289 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST2H2BEQ16778 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 RSPO1Q2MKA7 263 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 ABCA11PQ4W5N1 156 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 BRICD5Q6PL45 260 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 LMX1AQ8TE12 382 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BHQ93079 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BNQ99877 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 HIST1H2BMQ99879 126 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 PIGQQ9BRB3 760 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 B3GALT1Q9Y5Z6 326 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 PIAS3Q9Y6X2 628 aa17.21■□□□□ 0.35
RPUSD3-216ENST00000484134 TGIF2-C20orf24A0A0A6YYL0 155 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 DBHP09172 617 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 DUSP1P28562 367 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 EWSR1Q01844 656 aaKnown RBP eCLIP17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 TAF9Q16594 264 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 C20orf196Q8IYI0 205 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 D2HGDHQ8N465 521 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 LRTM2Q8N967 370 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF610Q8N9Z0 462 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 ZFP62Q8NB50 900 aaPredicted RBP17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 MVB12AQ96EY5 273 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 C14orf144Q96I85 54 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 PIGLQ9Y2B2 252 aa17.21■□□□□ 0.34
RPUSD3-216ENST00000484134 CFAP54Q96N23 3096 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 FAM24AA6NFZ4 105 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 ANGPTL7O43827 346 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 HEXBP07686 556 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 SOD3P08294 240 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 SRP19P09132 144 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 KCNMB1Q16558 191 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 OR2G3Q8NGZ4 309 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 BOD1Q96IK1 185 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 GPR61Q9BZJ8 451 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 OPA3Q9H6K4 179 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 SLC2A9Q9NRM0 540 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 V9GYS6 101 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 FAM221AA4D161 298 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 ATP6V0CP27449 155 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 CCR5P51681 352 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 GRB2P62993 217 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 ARL6IP1Q15041 203 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 HIST3H3Q16695 136 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 PDZD11Q5EBL8 140 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 CHRNA10Q9GZZ6 450 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 NELFAQ9H3P2 528 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF160Q9HCG1 818 aa17.2■□□□□ 0.34
RPUSD3-216ENST00000484134 OR5H15A6NDH6 313 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 DHRS3O75911 302 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 FOLR1P15328 257 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 UBE2KP61086 200 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 DLK1P80370 383 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 OR6X1Q8NH79 312 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 UCK1Q9HA47 277 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 NECAP2Q9NVZ3 263 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 LIPGQ9Y5X9 500 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 ASCC3Q8N3C0 2202 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 RNF224P0DH78 156 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 PLPPR5Q32ZL2 321 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 RTL6Q6ICC9 239 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 FBXL14Q8N1E6 418 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 OR4D5Q8NGN0 318 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 SUCNR1Q9BXA5 334 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 SMDT1Q9H4I9 107 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 C11orf1Q9H5F2 150 aa17.19■□□□□ 0.34
RPUSD3-216ENST00000484134 IGSF23A1L1A6 192 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF724A8MTY0 619 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 ETV2O00321 342 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 HIST1H1BP16401 226 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 CTSSP25774 331 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 SUMO3P55854 103 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 DEFB133Q30KQ1 61 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 SP5Q6BEB4 398 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 UNQ6494/PRO21346Q6UXR6 183 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 TMEM171Q8WVE6 324 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 SPRY1O43609 319 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 TRGC2P03986 189 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 DRD1P21728 446 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 OMGP23515 440 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF429Q86V71 674 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 CYB561D1Q8N8Q1 229 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 ZDHHC12Q96GR4 267 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 GPR173Q9NS66 373 aa17.18■□□□□ 0.34
RPUSD3-216ENST00000484134 CXorf65A6NEN9 183 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 ZNF133P52736 654 aaPredicted RBP17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 CFHR1Q03591 330 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 CHAF1BQ13112 559 aa17.17■□□□□ 0.34
RPUSD3-216ENST00000484134 EIF3IQ13347 325 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms