RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 OR5H1A6NKK0 313 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 MS4A18H0YCH9 400 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 GLI4P10075 376 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 AFF3P51826 1226 aaKnown RBP12.52□□□□□ -0.41
COL9A2-207ENST00000482722 SUCLG1P53597 346 aaKnown RBP12.52□□□□□ -0.41
COL9A2-207ENST00000482722 SPCS3P61009 180 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 NKX6-1P78426 367 aaPredicted RBP12.52□□□□□ -0.41
COL9A2-207ENST00000482722 HAGHQ16775 308 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 MS4A18Q3C1V0 323 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 BCO1Q9HAY6 547 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 PISDQ9UG56 409 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 POLR1DQ9Y2S0 133 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 RFNGQ9Y644 331 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 H0YL77 283 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 CYB5BO43169 146 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 IFNA10P01566 189 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 MBPP02686 304 aaPredicted RBP12.52□□□□□ -0.41
COL9A2-207ENST00000482722 MMP16P51512 607 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 DEFB123Q8N688 67 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 APCDD1LQ8NCL9 501 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 CADM4Q8NFZ8 388 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 OR10S1Q8NGN2 331 aa12.52□□□□□ -0.41
COL9A2-207ENST00000482722 AKIRIN1Q9H9L7 192 aaPredicted RBP12.52□□□□□ -0.41
COL9A2-207ENST00000482722 STRAPQ9Y3F4 350 aaKnown RBP12.52□□□□□ -0.41
COL9A2-207ENST00000482722 FAM186AA6NE01 2351 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 CACNA1HO95180 2353 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 ZNF724A8MTY0 619 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 TIAF1O95411 115 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 DIRAS3O95661 229 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 IFNA21P01568 189 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 CDAP32320 146 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 BIDP55957 195 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 UBE2KP61086 200 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 SHBQ15464 509 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 CARD17Q5XLA6 110 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 LRRC18Q8N456 261 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 OR10AD1Q8NGE0 317 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 KCNG3Q8TAE7 436 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 RNF133Q8WVZ7 376 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 C2orf88Q9BSF0 95 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 RNF4P78317 190 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 HIKESHIQ53FT3 197 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 OR2T2Q6IF00 324 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 GUSBP11Q6P575 273 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 OR5AS1Q8N127 324 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 ASB10Q8WXI3 467 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL9A2-207ENST00000482722 FGF21Q9NSA1 209 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 DCAF16Q9NXF7 216 aa12.51□□□□□ -0.41
COL9A2-207ENST00000482722 E5RGE8 158 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 H3BMH7 237 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 ASCL1P50553 236 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 TAS2R46P59540 309 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 DLK1P80370 383 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 HSF1Q00613 529 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 C1QL2Q7Z5L3 287 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 ZNF701Q9NV72 531 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-207ENST00000482722 NSG2Q9Y328 171 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 A0A1B0GW64 132 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 FTCDNL1E5RQL4 147 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 K7N7A8 449 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 HSD17B6O14756 317 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
COL9A2-207ENST00000482722 NHLH2Q02577 135 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 FOXF1Q12946 379 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 CHAF1BQ13112 559 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 CHRFAM7AQ494W8 412 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 DNM1P34Q6PK57 102 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 C17orf82Q86X59 251 aaPredicted RBP12.5□□□□□ -0.41
COL9A2-207ENST00000482722 SGPP2Q8IWX5 399 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 LFNGQ8NES3 379 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 TMEM234Q8WY98 164 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 SHDQ96IW2 340 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 ABHD14AQ9BUJ0 271 aa12.5□□□□□ -0.41
COL9A2-207ENST00000482722 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 BOD1L1Q8NFC6 3051 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 IGKV1D-8A0A087WSZ0 117 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 ELOA3CA0A087WX78 387 aaPredicted RBP12.49□□□□□ -0.41
COL9A2-207ENST00000482722 RBFOX3A6NFN3 312 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 QDPRP09417 244 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 TRGC1P0CF51 173 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 CASP6P55212 293 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
COL9A2-207ENST00000482722 DNLZQ5SXM8 178 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 OGFOD3Q6PK18 319 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 H1FNTQ75WM6 255 aaPredicted RBP12.49□□□□□ -0.41
COL9A2-207ENST00000482722 OR51T1Q8NGJ9 327 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 ABHD5Q8WTS1 349 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 GPR84Q9NQS5 396 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 KLRF1Q9NZS2 232 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 CNOT1A5YKK6 2376 aaKnown RBP12.49□□□□□ -0.41
COL9A2-207ENST00000482722 A0A1B0GX78 115 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 ZNF878C9JN71 531 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 ATXN7O15265 892 aaPredicted RBP12.49□□□□□ -0.41
COL9A2-207ENST00000482722 GPR137BO60478 399 aa12.49□□□□□ -0.41
COL9A2-207ENST00000482722 SNRPCP09234 159 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms