RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 F8VWA3 439 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 SPRY1O43609 319 aaPredicted RBP17.34■□□□□ 0.37
SEC13-217ENST00000482647 FCN3O75636 299 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 KNG1P01042 644 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 IFNA2P01563 188 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 TFF1P04155 84 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 ALDOBP05062 364 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 GPR50Q13585 617 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 DGUOKQ16854 277 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 ASPHD2Q6ICH7 369 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 C1orf229Q6ZS94 237 aaPredicted RBP17.34■□□□□ 0.37
SEC13-217ENST00000482647 SATL1Q86VE3 508 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 CD177Q8N6Q3 437 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 PNLDC1Q8NA58 520 aaKnown RBP17.34■□□□□ 0.37
SEC13-217ENST00000482647 ZSCAN4Q8NAM6 433 aaPredicted RBP17.34■□□□□ 0.37
SEC13-217ENST00000482647 NANPQ8TBE9 248 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 THRSPQ92748 146 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 OR14A2Q96R54 314 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 TMEM138Q9NPI0 162 aa17.34■□□□□ 0.37
SEC13-217ENST00000482647 SLC25A10Q9UBX3 287 aaPredicted RBP17.34■□□□□ 0.37
SEC13-217ENST00000482647 TMEM225BP0DP42 221 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 BCL3P20749 454 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 GABARAPL2P60520 117 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 SCGB2A2Q13296 93 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 FIP1L1Q6UN15 594 aaKnown RBP17.33■□□□□ 0.36
SEC13-217ENST00000482647 C1QL2Q7Z5L3 287 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 SAXO1Q8IYX7 474 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 ZNF561Q8N587 486 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 ZNRF1Q8ND25 227 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 OR51A2Q8NGJ7 313 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 OR5D18Q8NGL1 313 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 UFD1Q92890 307 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 EMG1Q92979 244 aaKnown RBP17.33■□□□□ 0.36
SEC13-217ENST00000482647 YTHDF1Q9BYJ9 559 aaKnown RBP17.33■□□□□ 0.36
SEC13-217ENST00000482647 RHOFQ9HBH0 211 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 ISYNA1Q9NPH2 558 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 OR14J1Q9UGF5 321 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 MAB21L2Q9Y586 359 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 WNK2Q9Y3S1 2297 aa17.33■□□□□ 0.36
SEC13-217ENST00000482647 ARHGAP32A7KAX9 2087 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 TRBV5-7A0A0A0MS05 114 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 ANGPTL7O43827 346 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 MRPS14O60783 128 aaKnown RBP17.32■□□□□ 0.36
SEC13-217ENST00000482647 GPX5O75715 221 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 HSMCR30P0CW71 290 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 PPIAL4GP0DN37 164 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 SELLP14151 372 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 NDUFB7P17568 137 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 ADRA2CP18825 462 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 MAPK3P27361 379 aaPredicted RBP17.32■□□□□ 0.36
SEC13-217ENST00000482647 TGFBR2P37173 567 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 MAP2K4P45985 399 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 NPBWR2P48146 333 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 CAV3P56539 151 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 RNF144BQ7Z419 303 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 FAM58AQ8N1B3 248 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 FGFRL1Q8N441 504 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 OR52N4Q8NGI2 321 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 GPER1Q99527 375 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 RBFOX1Q9NWB1 397 aaKnown RBP17.32■□□□□ 0.36
SEC13-217ENST00000482647 METRNQ9UJH8 293 aa17.32■□□□□ 0.36
SEC13-217ENST00000482647 RPUSD1Q9UJJ7 312 aaKnown RBP17.32■□□□□ 0.36
SEC13-217ENST00000482647 A0A1W2PPK0 400 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 KDM4BO94953 1096 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 IGFBP3P17936 291 aaPredicted RBP17.31■□□□□ 0.36
SEC13-217ENST00000482647 BDKRB2P30411 391 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 CAPZA1P52907 286 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 TPBGQ13641 420 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 LIPKQ5VXJ0 399 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 CRIP3Q6Q6R5 217 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 TMEM185AQ8NFB2 350 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 ORAI1Q96D31 301 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 DMRTB1Q96MA1 342 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 DERL3Q96Q80 235 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 TMED9Q9BVK6 235 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 CNTD2Q9H8S5 307 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 GLS2Q9UI32 602 aa17.31■□□□□ 0.36
SEC13-217ENST00000482647 IGKV1-12A0A0C4DH73 117 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 IGKV1D-12P01611 117 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 CHRM2P08172 466 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 FSTP19883 344 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 ZNF93P35789 620 aaPredicted RBP17.3■□□□□ 0.36
SEC13-217ENST00000482647 CEBPDP49716 269 aaPredicted RBP17.3■□□□□ 0.36
SEC13-217ENST00000482647 ZP1P60852 638 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 MLLT11Q13015 90 aaPredicted RBP17.3■□□□□ 0.36
SEC13-217ENST00000482647 TBCEQ15813 527 aaPredicted RBP17.3■□□□□ 0.36
SEC13-217ENST00000482647 ACSM3Q53FZ2 586 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 DDI2Q5TDH0 399 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 PRIMA1Q86XR5 153 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 LY6G5BQ8NDX9 201 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 H1FXQ92522 213 aaKnown RBP17.3■□□□□ 0.36
SEC13-217ENST00000482647 DCTN5Q9BTE1 182 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 SEBOXQ9HB31 216 aaPredicted RBP17.3■□□□□ 0.36
SEC13-217ENST00000482647 HMG20AQ9NP66 347 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 FOXJ3Q9UPW0 622 aa17.3■□□□□ 0.36
SEC13-217ENST00000482647 GABRPO00591 440 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 PRKACAP17612 351 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 FGF12P61328 243 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 ARMCX4Q5H9R4 360 aa17.29■□□□□ 0.36
SEC13-217ENST00000482647 SPIN3Q5JUX0 258 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms