RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 C4orf36Q96KX1 117 aa8.53□□□□□ -1.04
CPSF4-212ENST00000482251 DMRTB1Q96MA1 342 aa8.53□□□□□ -1.04
CPSF4-212ENST00000482251 SPACA5Q96QH8 159 aa8.53□□□□□ -1.04
CPSF4-212ENST00000482251 SSX3Q99909 188 aa8.53□□□□□ -1.04
CPSF4-212ENST00000482251 CHST6Q9GZX3 395 aa8.53□□□□□ -1.04
CPSF4-212ENST00000482251 FRRS1LQ9P0K9 344 aa8.53□□□□□ -1.04
CPSF4-212ENST00000482251 SF3B6Q9Y3B4 125 aaKnown RBP8.53□□□□□ -1.04
CPSF4-212ENST00000482251 GMPPBQ9Y5P6 360 aa8.53□□□□□ -1.04
CPSF4-212ENST00000482251 IGKV1-9A0A0C4DH69 117 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 A0A1W2PPH5 198 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 KCNAB3O43448 404 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 HAND1O96004 215 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 SERPINA3P01011 423 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 HTR1AP08908 422 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 OCM2P0CE71 109 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 OCMP0CE72 109 aaPredicted RBP8.52□□□□□ -1.05
CPSF4-212ENST00000482251 BCL3P20749 454 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 AZGP1P25311 298 aaKnown RBP8.52□□□□□ -1.05
CPSF4-212ENST00000482251 NPBWR2P48146 333 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 FUT6P51993 359 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 RPL15P61313 204 aaKnown RBP8.52□□□□□ -1.05
CPSF4-212ENST00000482251 SNRPGP62308 76 aaKnown RBP8.52□□□□□ -1.05
CPSF4-212ENST00000482251 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 TCF23Q7RTU1 214 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 RNF144BQ7Z419 303 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 LHFPL4Q7Z7J7 247 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 ENTHD1Q8IYW4 607 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 C11orf42Q8N5U0 333 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 BEND2Q8NDZ0 799 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 OR13C3Q8NGS6 347 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 FGGYQ96C11 551 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 LGALS12Q96DT0 336 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 PELI1Q96FA3 418 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 AJUBAQ96IF1 538 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 CITED1Q99966 193 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 ALG8Q9BVK2 526 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 AMBNQ9NP70 447 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 SIGLEC9Q9Y336 463 aa8.52□□□□□ -1.05
CPSF4-212ENST00000482251 TMEM82A0PJX8 343 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 J3QRE1 110 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 K7N7A8 449 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 ZNF737O75373 536 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 ARG1P05089 322 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 DBTP11182 482 aaKnown RBP8.51□□□□□ -1.05
CPSF4-212ENST00000482251 PRKACAP17612 351 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 ATF1P18846 271 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 GABRR1P24046 479 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 RBP2P50120 134 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 DLX6P56179 175 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 MTCP1P56278 107 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 LGALS4P56470 323 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 PROK1P58294 105 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 OCLNQ16625 522 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 LRRC75BQ2VPJ9 315 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 MIDNQ504T8 468 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 TMEM244Q5VVB8 128 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 MEDAGQ5VYS4 303 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 LPCAT4Q643R3 524 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 LHFPL3Q86UP9 236 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 EGFL6Q8IUX8 553 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 OR8H2Q8N162 312 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 ACBD7Q8N6N7 88 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 ZNF676Q8N7Q3 588 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 ZSCAN4Q8NAM6 433 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-212ENST00000482251 OR13C9Q8NGT0 318 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 OR5R1Q8NH85 324 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 PPP1R35Q8TAP8 253 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 TRUB1Q8WWH5 349 aaKnown RBP8.51□□□□□ -1.05
CPSF4-212ENST00000482251 PP6455Q8WZ26 134 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 OPALINQ96PE5 141 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 SLC29A1Q99808 456 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 C9orf16Q9BUW7 83 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 FAM234AQ9H0X4 552 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 HEXA-AS1Q9H8Q6 139 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 ISG20L2Q9H9L3 353 aaKnown RBP8.51□□□□□ -1.05
CPSF4-212ENST00000482251 NEK6Q9HC98 313 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 TCF7L1Q9HCS4 588 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 MYRFQ9Y2G1 1151 aa8.51□□□□□ -1.05
CPSF4-212ENST00000482251 IGKV1-12A0A0C4DH73 117 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 hCG_1809904A0A1W2PP81 198 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 A0A1W2PPE2 198 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 A0A1W2PR64 198 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 A0A1W2PRV1 198 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 E9PQ18 207 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 SIRPB1O00241 398 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 CHST1O43916 411 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 PSPNO60542 156 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 TSPAN15O95858 294 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 CYB5AP00167 134 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 IGKV1D-12P01611 117 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 CHRM2P08172 466 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 JUNBP17275 347 aaPredicted RBP8.5□□□□□ -1.05
CPSF4-212ENST00000482251 GABRB1P18505 474 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 TGFBR2P37173 567 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 ATP1B3P54709 279 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 ACTA2P62736 377 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 ACTG2P63267 376 aa8.5□□□□□ -1.05
CPSF4-212ENST00000482251 DYNC1I2Q13409 638 aaKnown RBP8.5□□□□□ -1.05
CPSF4-212ENST00000482251 ALKBH1Q13686 389 aaKnown RBP8.5□□□□□ -1.05
CPSF4-212ENST00000482251 GRK1Q15835 563 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms