RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 FSHBP01225 129 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 FPR2P25090 351 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 MAPK3P27361 379 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-212ENST00000482152 SOX2P48431 317 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 IKZF1Q13422 519 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 KISS1Q15726 138 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 ARMCX4Q5H9R4 360 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 SLAMF9Q96A28 289 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 ZNF488Q96MN9 340 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 DCTN5Q9BTE1 182 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 YTHDF1Q9BYJ9 559 aaKnown RBP13.53□□□□□ -0.24
CCDC78-212ENST00000482152 PAK1IP1Q9NWT1 392 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-212ENST00000482152 NUP50Q9UKX7 468 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 MAB21L2Q9Y586 359 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 KPTNQ9Y664 436 aa13.53□□□□□ -0.24
CCDC78-212ENST00000482152 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 KDM4BO94953 1096 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 PLATP00750 562 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 POU3F4P49335 361 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 RPS11P62280 158 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC78-212ENST00000482152 ZNF146Q15072 292 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 DGUOKQ16854 277 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 SPIN3Q5JUX0 258 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 METTL11BQ5VVY1 283 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 C1orf122Q6ZSJ8 110 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 CMTM4Q8IZR5 234 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 FAM58AQ8N1B3 248 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 CD177Q8N6Q3 437 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 KIR3DL3Q8N743 410 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 PXT1Q8NFP0 134 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 OR5D13Q8NGL4 314 aa13.52□□□□□ -0.25
CCDC78-212ENST00000482152 LSM2Q9Y333 95 aaKnown RBP13.52□□□□□ -0.25
CCDC78-212ENST00000482152 ANK3Q12955 4377 aaKnown RBP13.52□□□□□ -0.25
CCDC78-212ENST00000482152 A0A1W2PPH5 198 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 FCN3O75636 299 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 TMEM225BP0DP42 221 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 NDUFB7P17568 137 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 FSTP19883 344 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 EPHA1P21709 976 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 FGF12P61328 243 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 PDCD1Q15116 288 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 MED22Q15528 200 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 USP43Q70EL4 1123 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 CDH26Q8IXH8 852 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 ZFP41Q8N8Y5 198 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 ZNRF1Q8ND25 227 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 EMG1Q92979 244 aaKnown RBP13.51□□□□□ -0.25
CCDC78-212ENST00000482152 WDFY2Q96P53 400 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 CCDC90BQ9GZT6 254 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 HMG20AQ9NP66 347 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 PCDHB16Q9NRJ7 776 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 TAS2R4Q9NYW5 299 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 FOXJ3Q9UPW0 622 aa13.51□□□□□ -0.25
CCDC78-212ENST00000482152 TRBV5-7A0A0A0MS05 114 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 A0A1B0GW55 424 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 TCF21O43680 179 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 TOX4O94842 621 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 TK1P04183 234 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4L2P0CJ85 424 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4L3P0CJ86 424 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4L4P0CJ87 422 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4L5P0CJ88 424 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4L6P0CJ89 424 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4L7P0CJ90 424 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 IGFBP3P17936 291 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-212ENST00000482152 EEF1B2P24534 225 aaKnown RBP13.5□□□□□ -0.25
CCDC78-212ENST00000482152 BDKRB2P30411 391 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 TGFBR2P37173 567 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 TRAM1Q15629 374 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4L9Q6RFH8 374 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-212ENST00000482152 TMEM185AQ8NFB2 350 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 PPP1R35Q8TAP8 253 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 ZNF418Q8TF45 676 aaPredicted RBP13.5□□□□□ -0.25
CCDC78-212ENST00000482152 H1FXQ92522 213 aaKnown RBP13.5□□□□□ -0.25
CCDC78-212ENST00000482152 OR5M11Q96RB7 305 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 GPER1Q99527 375 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 DUX4Q9UBX2 424 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 OR14J1Q9UGF5 321 aa13.5□□□□□ -0.25
CCDC78-212ENST00000482152 MEGF11A6BM72 1044 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 K7N7A8 449 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 SH2D1BO14796 132 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 SPRY1O43609 319 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-212ENST00000482152 RRP9O43818 475 aaKnown RBP13.49□□□□□ -0.25
CCDC78-212ENST00000482152 BCL3P20749 454 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 NPBWR2P48146 333 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 CAPZA1P52907 286 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 GABARAPL2P60520 117 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 ZP1P60852 638 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 TPBGQ13641 420 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 BLMHQ13867 455 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 DOC2BQ14184 412 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 ELP2Q6IA86 826 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 ASCL4Q6XD76 172 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 C9orf139Q6ZV77 190 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 SATL1Q86VE3 508 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 UFD1Q92890 307 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 RFT1Q96AA3 541 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 SNX22Q96L94 193 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 SPACA5Q96QH8 159 aa13.49□□□□□ -0.25
CCDC78-212ENST00000482152 JMJD8Q96S16 334 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms