RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ARG1P05089 322 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 VSIG10L2P0DP72 767 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 CCL1P22362 96 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 ATP6V1E1P36543 226 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 POLR2IP36954 125 aaKnown RBP12.36□□□□□ -0.43
LIMS3-203ENST00000480744 ERVK11-1P61568 191 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 UBE2V2Q15819 145 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 C11orf88Q6PI97 169 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 GDPD3Q7L5L3 318 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 CEP19Q96LK0 163 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 OSBPL10Q9BXB5 764 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 RIBC2Q9H4K1 309 aa12.36□□□□□ -0.43
LIMS3-203ENST00000480744 RANBP3Q9H6Z4 567 aaPredicted RBP12.36□□□□□ -0.43
LIMS3-203ENST00000480744 C17orf98A8MV24 154 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 F8VVB4 439 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 F8VWA3 439 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 GATBO75879 557 aaKnown RBP12.35□□□□□ -0.43
LIMS3-203ENST00000480744 CHRM2P08172 466 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 OR2T7P0C7T2 308 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 HTR1FP30939 366 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 RAB13P51153 203 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 DYNC1I2Q13409 638 aaKnown RBP12.35□□□□□ -0.43
LIMS3-203ENST00000480744 EDDM3AQ14507 147 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 FAM189A2Q15884 450 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 CRIP3Q6Q6R5 217 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 Q6ZSR3 168 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 SLC25A26Q70HW3 274 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 EGFL6Q8IUX8 553 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 DYNAPQ8N1N2 210 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 OR13D1Q8NGV5 346 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 BORCS8Q96FH0 119 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 ABCB10Q9NRK6 738 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 MTCH1Q9NZJ7 389 aa12.35□□□□□ -0.43
LIMS3-203ENST00000480744 PRKDCP78527 4128 aaKnown RBP12.35□□□□□ -0.43
LIMS3-203ENST00000480744 IGKV1-27A0A075B6S5 117 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 EI24O14681 340 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 ALPLP05186 524 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 ZNF728P0DKX0 622 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 FUT6P51993 359 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 DLX6P56179 175 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 SSX2Q16385 188 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 FAM220AQ7Z4H9 259 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 PQLC1Q8N2U9 271 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 PIFOQ8TCI5 191 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
LIMS3-203ENST00000480744 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
LIMS3-203ENST00000480744 GABARAPL3Q9BY60 117 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 CHST5Q9GZS9 411 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 GNG8Q9UK08 70 aa12.34□□□□□ -0.43
LIMS3-203ENST00000480744 LOC107986453A0A1B0GWG9 222 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 ERICH4A6NGS2 130 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF737O75373 536 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 SULT1C4O75897 302 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 SERPINA3P01011 423 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 POU3F4P49335 361 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 SNU13P55769 128 aaKnown RBP12.33□□□□□ -0.44
LIMS3-203ENST00000480744 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
LIMS3-203ENST00000480744 CNN3Q15417 329 aaKnown RBP12.33□□□□□ -0.44
LIMS3-203ENST00000480744 TP53I3Q53FA7 332 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 KIAA2026Q5HYC2 2103 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 TMEM219Q86XT9 240 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 RDH10Q8IZV5 341 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 OR8H2Q8N162 312 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 LYG1Q8N1E2 194 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 PRSS35Q8N3Z0 413 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 TPRX1Q8N7U7 411 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 RPS4Y2Q8TD47 263 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF714Q96N38 554 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 TCF19Q9Y242 345 aa12.33□□□□□ -0.44
LIMS3-203ENST00000480744 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
LIMS3-203ENST00000480744 A0A0G2JK05 382 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 TMEM82A0PJX8 343 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 FAM90A8PA6NJQ4 464 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 ODF3BA8MYP8 253 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 E9PQ18 207 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 HAND1O96004 215 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 UBCP0CG48 685 aaKnown RBP12.32□□□□□ -0.44
LIMS3-203ENST00000480744 IGHV1-8P0DP01 117 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 CALCBP10092 127 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 GABRR1P24046 479 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 KIR3DL2P43630 455 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 GRK1Q15835 563 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 ARSJQ5FYB0 599 aaPredicted RBP12.32□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF626Q68DY1 528 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 CBR4Q8N4T8 237 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 DTX3Q8N9I9 347 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 CCDC54Q8NEL0 328 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 OR8J1Q8NGP2 316 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 CFHR4Q92496 578 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 EME1Q96AY2 570 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 MALSU1Q96EH3 234 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 SNX22Q96L94 193 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 SLC29A1Q99808 456 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 CHST6Q9GZX3 395 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF702PQ9H963 129 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 IL36RNQ9UBH0 155 aa12.32□□□□□ -0.44
LIMS3-203ENST00000480744 hADV38S2A0JD32 116 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 MEGF11A6BM72 1044 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 VGLL3A8MV65 326 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms